Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RN7SKP132-201ENST00000516001 208 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 RNU1-117P-201ENST00000517041 158 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 RNU6-1271P-201ENST00000517049 105 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
CTHRC1Q96CG8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 AC068205.3-201ENST00000636385 468 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.56□□□□□ -2
CTHRC1Q96CG8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CTHRC1Q96CG8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTHRC1Q96CG8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CTHRC1Q96CG8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNU4-90P-201ENST00000362773 141 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 SNORD81.1-201ENST00000363064 77 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNU6-1026P-201ENST00000384465 108 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 MIR215-201ENST00000384858 110 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNU6-1203P-201ENST00000410703 110 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 ELOCP21-201ENST00000412558 336 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 DEFB131C-201ENST00000528817 165 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
CTHRC1Q96CG8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CTHRC1Q96CG8 snoU2_19.2-201ENST00000363024 80 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 RNU6-944P-201ENST00000364023 107 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 RNU6-1175P-201ENST00000365200 107 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 Y_RNA.489-201ENST00000384410 101 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 Y_RNA.581-201ENST00000391017 97 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 RAB28P5-201ENST00000427490 651 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 RNU7-14P-201ENST00000459331 62 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.54□□□□□ -2
CTHRC1Q96CG8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.54□□□□□ -2
CTHRC1Q96CG8 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 RNU6-1098P-201ENST00000516772 96 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AC018630.3-201ENST00000542637 96 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CTHRC1Q96CG8 MIR4423-201ENST00000580922 80 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AC023043.3-201ENST00000593113 385 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CTHRC1Q96CG8 AL449363.1-201ENST00000617815 186 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AC006001.4-201ENST00000622243 395 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CTHRC1Q96CG8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 MTND5P6-201ENST00000422338 1798 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
CTHRC1Q96CG8 AC108206.1-201ENST00000570186 4159 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 AL391987.6-201ENST00000305671 199 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 RNU6-234P-201ENST00000365229 104 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 Y_RNA.350-201ENST00000365409 98 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 Y_RNA.570-201ENST00000384750 101 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC004866.1-201ENST00000411748 78 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 SNORA59A-201ENST00000459326 152 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 RPL39P38-201ENST00000467018 153 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 RNU6-496P-201ENST00000516145 99 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC023157.2-201ENST00000540596 141 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC037487.3-201ENST00000606668 112 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 AC004467.1-201ENST00000615678 330 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 MIR3674-201ENST00000636576 68 ntBASIC2.53□□□□□ -2
CTHRC1Q96CG8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
CTHRC1Q96CG8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 MIR335-201ENST00000362173 94 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 SNORD56.5-201ENST00000364281 72 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 SNORD87-201ENST00000364849 89 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.307-201ENST00000365022 117 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms