Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-475P-201ENST00000516073 104 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 RNU6-991P-201ENST00000516168 107 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.683-201ENST00000516508 93 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 RNA5SP402-201ENST00000517148 110 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AL442163.3-201ENST00000554110 156 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 MIR3126-201ENST00000577443 74 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AC016925.2-201ENST00000605108 242 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 AC016717.2-201ENST00000609089 5141 ntBASIC2.89□□□□□ -1.95
CHMP4CQ96CF2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 RNA5SP361-201ENST00000362686 118 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.132-201ENST00000363421 102 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 SNORA67.1-201ENST00000364749 141 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.526-201ENST00000384572 110 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 MIR300-201ENST00000401138 83 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 RNU2-48P-201ENST00000410694 191 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 AC010095.1-201ENST00000443543 144 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 HMGN2P18-201ENST00000450680 270 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 AC091179.3-201ENST00000474761 144 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 RN7SL636P-201ENST00000497504 294 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 ATP5EP1-201ENST00000510257 156 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 SNORA40.14-201ENST00000516543 86 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 AP003072.1-201ENST00000531740 145 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 MIR5188-201ENST00000583467 113 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 SNORD58B-201ENST00000607313 66 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 AP006437.1-201ENST00000641440 3685 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 MTND5P35-201ENST00000557537 1720 ntBASIC2.88□□□□□ -1.95
CHMP4CQ96CF2 RNU6-1301P-201ENST00000362724 104 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 SNORD31B-201ENST00000364977 69 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.424-201ENST00000384063 103 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 AL359511.1-201ENST00000402970 211 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 IFNA11P-201ENST00000446352 526 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 RN7SKP49-201ENST00000516675 260 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 CYCSP23-201ENST00000519781 313 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 CYCSP26-201ENST00000534107 320 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 AP002770.2-201ENST00000543613 532 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 RRN3P3-201ENST00000549207 578 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 AC026271.5-201ENST00000577873 130 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 SNORD53-201ENST00000579969 78 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 MIR4753-201ENST00000585119 83 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 RPS29P30-201ENST00000600975 111 ntBASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.80-201ENST00000362996 102 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 RNU1-51P-201ENST00000365345 176 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.485-201ENST00000384395 102 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 RNY3P4-201ENST00000384428 101 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 SNORA67.4-201ENST00000384688 142 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 MIR329-1-201ENST00000385028 80 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 MRPL42P3-201ENST00000401492 326 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC074290.1-201ENST00000448883 135 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AL137159.1-201ENST00000452808 512 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC021269.2-201ENST00000532318 330 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 MYL12BP1-201ENST00000569826 507 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 MZT1P2-201ENST00000604387 248 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC025754.2-201ENST00000606491 432 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 AC067747.1-201ENST00000608026 250 ntBASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP4CQ96CF2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 Y_RNA.27-201ENST00000362540 103 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 RNU6-545P-201ENST00000362681 104 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 RNU6-318P-201ENST00000384283 103 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 RNU1-148P-201ENST00000384472 162 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AL590004.1-201ENST00000405321 300 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 SRIP3-201ENST00000413200 219 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 IPO7P1-201ENST00000442031 636 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC114982.1-201ENST00000469402 321 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC093259.1-201ENST00000509755 300 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 PRELID2P1-201ENST00000552837 301 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC040896.1-201ENST00000613819 479 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 MIR1291-201ENST00000627649 87 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC068205.3-201ENST00000636385 468 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 AC091812.1-201ENST00000432235 1948 ntBASIC2.85□□□□□ -1.95
CHMP4CQ96CF2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP4CQ96CF2 SNORA33.2-201ENST00000365413 134 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms