Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RRN3P3-201ENST00000549207 578 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 AC104984.5-201ENST00000586878 94 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 AL512598.1-201ENST00000610158 273 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 MIR3662-201ENST00000637030 95 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
RTN4IP1Q8WWV3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 MTND4P5-201ENST00000435821 1374 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 RNU6-661P-201ENST00000362409 107 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 MIR150-201ENST00000385048 84 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 MIR548B-201ENST00000385247 97 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 RNA5SP504-201ENST00000410676 117 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AL353572.1-201ENST00000442490 417 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC007395.1-201ENST00000451333 677 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC007215.1-201ENST00000464893 276 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 RNU6-856P-201ENST00000516959 98 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 RNA5SP437-201ENST00000517249 129 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 SUMO2P18-201ENST00000518873 252 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 MIR4524B-201ENST00000581569 115 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 AC126177.8-201ENST00000618339 1015 ntBASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
RTN4IP1Q8WWV3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 SNORA67.2-201ENST00000384300 149 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 MIR32-201ENST00000384965 70 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 NCOR1P3-201ENST00000420479 303 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 RPL30P10-201ENST00000488148 337 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC069439.1-201ENST00000494739 167 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC011352.1-201ENST00000512300 793 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 RNU6-864P-201ENST00000516256 108 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 RNU1-117P-201ENST00000517041 158 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 POLR3GP2-201ENST00000588366 668 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC019193.3-201ENST00000609144 554 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AC095038.3-201ENST00000634439 195 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 AL133216.2-202ENST00000634512 349 ntBASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
RTN4IP1Q8WWV3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
RTN4IP1Q8WWV3 AC091812.1-201ENST00000432235 1948 ntBASIC1.09□□□□□ -2.24
RTN4IP1Q8WWV3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
RTN4IP1Q8WWV3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 RNA5SP99-201ENST00000364020 114 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 SNORD87-201ENST00000364849 89 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 Y_RNA.453-201ENST00000384223 109 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC009237.7-201ENST00000447357 229 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 NFU1P2-201ENST00000448700 469 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 RN7SKP210-201ENST00000459176 261 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC067942.3-201ENST00000512025 362 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 MTND1P5-201ENST00000517906 940 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AK6P2-201ENST00000549020 471 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 UBL5P4-201ENST00000562584 236 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 MIR4753-201ENST00000585119 83 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 MIR8074-201ENST00000615081 81 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 BX322639.1-202ENST00000423987 2213 ntBASIC1.08□□□□□ -2.24
RTN4IP1Q8WWV3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 MIR26B-201ENST00000362251 77 ntBASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 RNU1-96P-201ENST00000364163 162 ntBASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 RNU6-842P-201ENST00000384269 107 ntBASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 RNU6-975P-201ENST00000384296 105 ntBASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.07□□□□□ -2.24
RTN4IP1Q8WWV3 RNU6-482P-201ENST00000391068 107 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms