Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 MTND5P35-201ENST00000557537 1720 ntBASIC2.96□□□□□ -1.94
PRPF38AQ8NAV1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-1301P-201ENST00000362724 104 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 RNA5SP393-201ENST00000363423 117 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 MIR586-201ENST00000385035 97 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AL033519.2-201ENST00000403958 392 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 MIR1283-1-201ENST00000408494 87 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 RN7SKP284-201ENST00000411002 343 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-1001P-201ENST00000411265 100 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AC096644.2-201ENST00000429278 159 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 IFNA11P-201ENST00000446352 526 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 U8.22-201ENST00000459141 133 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AC091179.3-201ENST00000474761 144 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AC093259.1-201ENST00000509755 300 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 AC008873.1-201ENST00000625051 138 ntBASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 SNORA22B-201ENST00000383876 138 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.422-201ENST00000384054 114 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.424-201ENST00000384063 103 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 MIR329-1-201ENST00000385028 80 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 MIR1262-201ENST00000408276 93 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC016925.1-201ENST00000458303 298 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC074133.1-201ENST00000515696 183 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.721-201ENST00000517207 102 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AL031274.2-201ENST00000599419 203 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC245884.12-201ENST00000615364 59 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AL078596.1-201ENST00000624856 447 ntBASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PRPF38AQ8NAV1 AC009487.4-201ENST00000624969 3585 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.148-201ENST00000363557 117 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 MIR518C-201ENST00000384822 101 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 SNORA40.19-201ENST00000390846 128 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 SNORD78.2-201ENST00000391076 69 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC004866.1-201ENST00000411748 78 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC123900.1-201ENST00000420390 96 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC010095.1-201ENST00000443543 144 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC112492.4-201ENST00000456549 352 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 TRBV12-1-201ENST00000479785 344 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 SRIP1-201ENST00000489235 288 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC008413.1-201ENST00000511864 177 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 RNA5SP137-201ENST00000516833 135 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 SNORD53-201ENST00000579969 78 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 MIR5188-201ENST00000583467 113 ntBASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.93□□□□□ -1.94
PRPF38AQ8NAV1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 SNORD14.1-201ENST00000365609 90 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 MRPL42P3-201ENST00000401492 326 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 RNA5SP270-201ENST00000411361 118 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 OOSP1P1-201ENST00000423265 274 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 SUMO1P4-201ENST00000429430 302 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 CHEK2P4-201ENST00000450340 246 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 RNU2-34P-201ENST00000516534 121 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 RNU1-117P-201ENST00000517041 158 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AC016925.2-201ENST00000605108 242 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 SNORD58B-201ENST00000607313 66 ntBASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-545P-201ENST00000362681 104 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 RNA5SP361-201ENST00000362686 118 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 RNU4-50P-201ENST00000364361 141 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 SNORA67.1-201ENST00000364749 141 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 DEFA7P-201ENST00000382676 285 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 RNU6-318P-201ENST00000384283 103 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 SNORD14D-201ENST00000384390 87 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 MIR29C-201ENST00000385231 88 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 AL590004.1-201ENST00000405321 300 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 SNORD12B-201ENST00000410433 91 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 UQCRBP2-201ENST00000447827 297 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 FCF1P4-201ENST00000448326 183 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 PCNPP5-201ENST00000452246 481 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 HMGB3P3-201ENST00000510526 400 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 MZT1P2-201ENST00000604387 248 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 AC025754.2-201ENST00000606491 432 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 AC064859.1-201ENST00000624741 174 ntBASIC2.91□□□□□ -1.94
PRPF38AQ8NAV1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRPF38AQ8NAV1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 650.9 ms