Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR3199-1-201ENST00000582434 88 ntBASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 RPL30P11-203ENST00000598995 310 ntBASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 SNRPGP20-201ENST00000604477 205 ntBASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLIP4Q8N3C7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU1-72P-201ENST00000362976 153 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU6-626P-201ENST00000363354 107 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU6-245P-201ENST00000384020 107 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MIR320B2-201ENST00000408479 138 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 RNU2-25P-201ENST00000411041 191 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC025750.2-201ENST00000442609 450 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MZT1P2-201ENST00000604387 248 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC090425.1-201ENST00000610007 140 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC006386.2-201ENST00000624491 75 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC012005.1-201ENST00000624575 75 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MIR7157-201ENST00000635801 60 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AL365361.1-201ENST00000566942 3481 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
CLIP4Q8N3C7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RNU6-961P-201ENST00000363893 105 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 Y_RNA.447-201ENST00000384184 113 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 MIR634-201ENST00000385208 97 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 SNORA46.1-201ENST00000391069 153 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RNU6-1203P-201ENST00000410703 110 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RNU2-38P-201ENST00000410856 79 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AC096920.1-201ENST00000423991 241 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 ARL5AP4-201ENST00000430731 512 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AC005002.2-201ENST00000438228 269 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RPL26P26-201ENST00000480251 434 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AC140059.1-201ENST00000489238 361 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 SNORA40.9-201ENST00000515895 93 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 SCARNA3-201ENST00000517097 143 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 RRN3P3-201ENST00000549207 578 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AL670379.2-201ENST00000604983 252 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 AL357075.2-201ENST00000614906 189 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
CLIP4Q8N3C7 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 SNORD113-8-201ENST00000363497 74 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 RNU6-727P-201ENST00000363592 107 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 RNU6-379P-201ENST00000363813 104 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 RNU6-20P-201ENST00000384106 107 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 RNU6-793P-201ENST00000384233 104 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 SNORD63-201ENST00000384262 68 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 RNU6-220P-201ENST00000390919 107 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC092427.1-202ENST00000430569 476 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC108059.2-201ENST00000434626 151 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC091179.3-201ENST00000474761 144 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC023141.11-201ENST00000508864 202 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 AC105245.1-201ENST00000581934 244 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 MIR3117-201ENST00000584034 78 ntBASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.3□□□□□ -2.04
CLIP4Q8N3C7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP4Q8N3C7 Y_RNA.14-201ENST00000362415 103 ntBASIC2.29□□□□□ -2.04
CLIP4Q8N3C7 RNU1-62P-201ENST00000362599 164 ntBASIC2.29□□□□□ -2.04
CLIP4Q8N3C7 SNORA80A-201ENST00000363922 136 ntBASIC2.29□□□□□ -2.04
CLIP4Q8N3C7 RNA5SP456-201ENST00000364002 114 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms