Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR2116-201ENST00000517221 80 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC093331.1-201ENST00000521474 169 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC114781.5-201ENST00000615297 108 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 AC140479.6-201ENST00000633535 357 ntBASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
DEPDC4Q8N2C3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 AL359837.1-201ENST00000381357 287 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 CD24P4-201ENST00000382840 243 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.432-201ENST00000384087 111 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 SNORA70C-201ENST00000384538 135 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-460P-201ENST00000391158 108 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 RNU2-32P-201ENST00000411193 191 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 AL161788.1-201ENST00000441805 169 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 AC097462.1-201ENST00000514125 324 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 RNA5SP153-201ENST00000516498 76 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-1234P-201ENST00000516877 103 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 MIR3199-1-201ENST00000582434 88 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 AL356280.1-201ENST00000603614 379 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 ZYXP1-201ENST00000617638 118 ntBASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
DEPDC4Q8N2C3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-484P-201ENST00000384016 107 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 SNORD20-201ENST00000384550 80 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.563-201ENST00000384707 108 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RNU1-101P-201ENST00000391171 127 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RPS26P8-201ENST00000393490 348 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RN7SKP179-201ENST00000516126 217 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 SNORA70.14-201ENST00000516205 110 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 RNA5SP143-201ENST00000516936 115 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 SNORA48.11-201ENST00000517015 89 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 AC034105.4-201ENST00000568304 277 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 AC120024.3-201ENST00000603167 156 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.81□□□□□ -1.8
DEPDC4Q8N2C3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AL355596.1-201ENST00000565399 3996 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 MIR218-1-201ENST00000384999 110 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 FO393413.1-201ENST00000402892 195 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC123900.1-201ENST00000420390 96 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC245102.2-201ENST00000448956 180 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC023449.1-201ENST00000454464 154 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 SNORA84-201ENST00000459229 133 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 RNU7-170P-201ENST00000459303 61 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC093259.1-201ENST00000509755 300 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-1299P-201ENST00000516316 100 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-659P-201ENST00000516454 104 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-126P-201ENST00000516685 103 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-965P-201ENST00000516721 96 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC090142.3-201ENST00000519012 385 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 MIR3138-201ENST00000585238 82 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 MIR4438-201ENST00000585271 93 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 AC103988.1-201ENST00000566382 2177 ntBASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.8□□□□□ -1.8
DEPDC4Q8N2C3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.203-201ENST00000364106 102 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-978P-201ENST00000364371 103 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 SNORA25.7-201ENST00000364375 127 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RNA5SP366-201ENST00000365454 123 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-1080P-201ENST00000383982 107 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RHEBP3-201ENST00000411920 351 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 AP001486.1-201ENST00000463339 476 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 AC090515.1-201ENST00000465295 476 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RN7SL271P-201ENST00000487601 295 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 SNORA4.4-201ENST00000515921 135 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-856P-201ENST00000516959 98 ntBASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
DEPDC4Q8N2C3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 MIR383-201ENST00000362257 73 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-1082P-201ENST00000364574 107 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.584-201ENST00000391090 114 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms