Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNY4P28-201ENST00000365281 93 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 RNU6-746P-201ENST00000384112 109 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 MIR153-2-201ENST00000385225 87 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 RNU7-120P-201ENST00000459334 63 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AC073901.1-201ENST00000462471 408 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 MRPL42P6-201ENST00000486397 371 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 SNORA31.23-201ENST00000517219 133 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 AP002392.1-201ENST00000537692 208 ntBASIC3.12□□□□□ -1.91
SYNE4Q8N205 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNE4Q8N205 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYNE4Q8N205 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYNE4Q8N205 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYNE4Q8N205 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 Y_RNA.122-201ENST00000363331 96 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 Y_RNA.319-201ENST00000365138 92 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 RNU6-1280P-201ENST00000365211 107 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 RNU6-281P-201ENST00000384212 103 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 Y_RNA.506-201ENST00000384494 102 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 MIR544A-201ENST00000384855 91 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 MIR329-1-201ENST00000385028 80 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 RNU2-49P-201ENST00000410666 184 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 AC074117.2-201ENST00000417130 397 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 AL392103.1-201ENST00000447000 198 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 MRPS10P1-201ENST00000448483 130 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 AP001025.1-201ENST00000486139 332 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 RPL21P9-201ENST00000556149 474 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.11□□□□□ -1.91
SYNE4Q8N205 AL590240.4-201ENST00000616908 390 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 AL353997.5-201ENST00000618886 171 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.11□□□□□ -1.91
SYNE4Q8N205 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYNE4Q8N205 RNU6-20P-201ENST00000384106 107 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 Y_RNA.464-201ENST00000384282 110 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 Y_RNA.570-201ENST00000384750 101 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC007064.1-201ENST00000412238 351 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC138623.1-201ENST00000418060 216 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 RNU6-1212P-201ENST00000517023 104 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 RNU6-58P-201ENST00000517143 103 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 RNU6-711P-201ENST00000517255 106 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 MIR5571-201ENST00000577998 113 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC005296.1-201ENST00000616145 209 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 AC021753.1-201ENST00000635724 168 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 MIR3199-2-201ENST00000636243 86 ntBASIC3.1□□□□□ -1.91
SYNE4Q8N205 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU6-626P-201ENST00000363354 107 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 Y_RNA.292-201ENST00000364904 97 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AL359511.1-201ENST00000402970 211 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU6-1140P-201ENST00000410517 106 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RPL19P1-201ENST00000411635 428 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 EIF1AXP1-201ENST00000419267 435 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNA5SP458-201ENST00000516188 119 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNY3P16-201ENST00000516338 101 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RN7SKP49-201ENST00000516675 260 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU7-110P-201ENST00000516891 62 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU2-31P-201ENST00000516954 155 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 ACA59.2-201ENST00000517061 156 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 RNU6-789P-201ENST00000517105 102 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.09□□□□□ -1.91
SYNE4Q8N205 HSPE1P4-201ENST00000550617 308 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AC019159.1-201ENST00000605094 187 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 SNORD113-5-201ENST00000607261 78 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.09□□□□□ -1.91
SYNE4Q8N205 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.09□□□□□ -1.91
SYNE4Q8N205 MAPK10-362ENST00000641864 4484 ntBASIC3.09□□□□□ -1.92
SYNE4Q8N205 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SYNE4Q8N205 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.09□□□□□ -1.92
SYNE4Q8N205 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYNE4Q8N205 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE4Q8N205 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE4Q8N205 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SYNE4Q8N205 Y_RNA.4-201ENST00000362333 112 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RNU6-1159P-201ENST00000362933 107 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RNU6-326P-201ENST00000365480 107 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RNU6-1145P-201ENST00000384246 107 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RNU6-541P-201ENST00000384709 110 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 Y_RNA.569-201ENST00000384749 103 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AL161651.1-201ENST00000440882 223 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC006026.2-201ENST00000457376 180 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 MED28P2-201ENST00000475771 317 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC091959.1-201ENST00000495857 238 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.08□□□□□ -1.92
SYNE4Q8N205 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC007336.1-201ENST00000576365 3828 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms