Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 RNA5SP109-201ENST00000391010 116 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1000P-201ENST00000391066 106 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC074290.1-201ENST00000448883 135 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC233266.1-201ENST00000454518 96 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC079382.1-201ENST00000493346 557 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC004584.2-201ENST00000570407 410 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 BNIP3P40-201ENST00000596017 556 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC064872.1-201ENST00000604823 1072 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC242852.1-201ENST00000612151 96 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 AC244015.1-201ENST00000622301 99 ntBASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-199P-201ENST00000362954 107 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 RNU4-92P-201ENST00000363783 136 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AL355796.1-201ENST00000406706 323 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AC016717.1-201ENST00000448918 286 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 LINC01399-202ENST00000458450 244 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 RNU7-21P-201ENST00000459430 62 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1069P-201ENST00000516612 133 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-685P-201ENST00000517088 95 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AP003168.1-201ENST00000530091 307 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AL359999.1-201ENST00000604513 294 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AC108676.2-201ENST00000605225 163 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AL603839.4-201ENST00000624658 1005 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 AL138960.2-201ENST00000625145 535 ntBASIC0.25□□□□□ -2.37
ARHGEF28Q8N1W1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-793P-201ENST00000384233 104 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1106P-201ENST00000390845 107 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 SNORD89-201ENST00000390981 114 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU1-119P-201ENST00000391122 165 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1093P-201ENST00000391194 107 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 MTCYBP36-201ENST00000404146 440 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AL031313.1-201ENST00000448435 256 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 SNRPGP12-201ENST00000449481 213 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 IGLVI-20-201ENST00000519296 130 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AP002001.1-203ENST00000534002 267 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 PCMTD1P2-201ENST00000565017 355 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AL390123.1-201ENST00000603216 237 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AL359075.3-201ENST00000613288 217 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AL031667.3-201ENST00000620124 655 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1287P-201ENST00000362914 107 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU5E-10P-201ENST00000363506 118 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 SNORD95.1-201ENST00000364099 68 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-809P-201ENST00000384461 107 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1060P-201ENST00000384664 107 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AL034345.1-201ENST00000407768 123 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-757P-201ENST00000410334 100 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU2-8P-201ENST00000410727 190 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 MTND1P20-201ENST00000430341 950 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 HMGB1P29-201ENST00000505659 499 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 AC138649.3-201ENST00000622154 254 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
ARHGEF28Q8N1W1 RNU4-73P-201ENST00000363164 141 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 MIR549A-201ENST00000385268 96 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 AL354692.1-201ENST00000423044 315 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 AC245047.3-201ENST00000429428 127 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 snoU109.3-201ENST00000459477 145 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 AP001180.6-201ENST00000584918 159 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 U6.114-201ENST00000636407 96 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 MTND4P5-201ENST00000435821 1374 ntBASIC0.23□□□□□ -2.37
ARHGEF28Q8N1W1 Y_RNA.18-201ENST00000362461 102 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 SNORD18A-201ENST00000363753 72 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1240P-201ENST00000365155 104 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 MIR660-201ENST00000385235 97 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 RNU7-57P-201ENST00000459540 60 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 SNORA31.10-201ENST00000516482 106 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 RNU6-1178P-201ENST00000516674 107 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 ZNF519P3-201ENST00000557158 1032 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 MIR4667-201ENST00000578933 66 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 Z99497.2-201ENST00000603634 310 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC022217.4-201ENST00000604389 163 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC240442.1-201ENST00000616055 283 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 uc_338.11-201ENST00000619132 160 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 AC068792.1-201ENST00000621354 417 ntBASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.22□□□□□ -2.37
ARHGEF28Q8N1W1 MTND5P17-201ENST00000418405 1603 ntBASIC0.21□□□□□ -2.38
ARHGEF28Q8N1W1 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
ARHGEF28Q8N1W1 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
ARHGEF28Q8N1W1 RNU6-163P-201ENST00000384396 106 ntBASIC0.21□□□□□ -2.38
ARHGEF28Q8N1W1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.21□□□□□ -2.38
ARHGEF28Q8N1W1 SNORA8.3-201ENST00000384679 139 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms