Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 RNU6-437P-201ENST00000459408 95 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 AC145146.1-201ENST00000496370 254 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 IGKV1-22-201ENST00000524313 326 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 PRELID2P1-201ENST00000552837 301 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 MIR3922-201ENST00000585192 84 ntBASIC3.3□□□□□ -1.88
ATG4DQ86TL0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATG4DQ86TL0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RNU6-756P-201ENST00000383997 107 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 Y_RNA.558-201ENST00000384685 113 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AL355796.1-201ENST00000406706 323 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 MIR1263-201ENST00000408324 86 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AL035423.1-201ENST00000420331 213 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC002075.2-201ENST00000425207 252 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 YME1L1P1-201ENST00000429435 297 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RPL39P40-201ENST00000445481 146 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RPL23AP7-203ENST00000449021 469 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RPL21P10-201ENST00000463521 490 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 RNU6-1299P-201ENST00000516316 100 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC026403.1-201ENST00000518938 295 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AP003327.1-201ENST00000529684 127 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC018630.3-201ENST00000542637 96 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AL022345.2-201ENST00000606307 135 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC009093.8-201ENST00000641769 292 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG4DQ86TL0 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
ATG4DQ86TL0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AC007656.2-201ENST00000624902 4547 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNU6-766P-201ENST00000362478 107 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNA5SP51-201ENST00000364750 119 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNA5SP173-201ENST00000364857 136 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNA5SP496-201ENST00000391240 109 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AL121890.1-201ENST00000435457 205 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AL161651.1-201ENST00000440882 223 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RPS29P31-201ENST00000446147 164 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 HMGN2P21-201ENST00000447764 270 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 RNU6-412P-201ENST00000516434 106 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 HSPE1P18-201ENST00000517602 280 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 SNORA51-201ENST00000606420 132 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AL021707.8-201ENST00000609428 183 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AC069200.1-201ENST00000609511 323 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 MIR6075-201ENST00000620782 95 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 MIR3199-2-201ENST00000636243 86 ntBASIC3.28□□□□□ -1.88
ATG4DQ86TL0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4DQ86TL0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.89
ATG4DQ86TL0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 Y_RNA.281-201ENST00000364774 94 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 SNORA70.4-201ENST00000365509 134 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 RNU6-1323P-201ENST00000384025 107 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 RNU6-1275P-201ENST00000391087 107 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 RNU6-638P-201ENST00000516582 104 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 AC062037.1-201ENST00000605302 128 ntBASIC3.27□□□□□ -1.89
ATG4DQ86TL0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4DQ86TL0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4DQ86TL0 AC010733.2-201ENST00000589496 5702 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms