Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RN7SL429P-201ENST00000479090 223 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RN7SL489P-201ENST00000486185 223 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RN7SL327P-201ENST00000488659 223 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-559P-201ENST00000516151 98 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RNU6-344P-201ENST00000516635 111 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MIR3945-201ENST00000581853 98 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 AL355802.3-201ENST00000607571 545 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 RN7SL853P-201ENST00000617250 223 ntBASIC1.93□□□□□ -2.1
NUP54Q7Z3B4 MIR340-201ENST00000362125 95 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU6-280P-201ENST00000364145 104 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU6-1297P-201ENST00000384415 104 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 MTND3P23-201ENST00000431980 347 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 AL353997.1-201ENST00000432936 108 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 AC097473.1-201ENST00000508142 408 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU1-41P-201ENST00000516161 162 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU1-48P-201ENST00000516400 162 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RNU6-1213P-201ENST00000517075 94 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 APOOP3-201ENST00000536787 586 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 RRN3P3-201ENST00000549207 578 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 MIR4753-201ENST00000585119 83 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 MIR1302-1-201ENST00000637932 143 ntBASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
NUP54Q7Z3B4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RNU1-62P-201ENST00000362599 164 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.70-201ENST00000362886 110 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RNU6-873P-201ENST00000363833 107 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RNA5SP493-201ENST00000364115 91 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 SNORD114-6-201ENST00000364393 72 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 Y_RNA.384-201ENST00000383909 102 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RNU6-310P-201ENST00000384655 107 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 SNORA48.1-201ENST00000390879 135 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 SNORA75.6-201ENST00000391318 127 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 MIR190B-201ENST00000401119 79 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 MTND4LP11-201ENST00000422184 280 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC139712.2-201ENST00000424302 339 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 MTCO1P44-201ENST00000441935 243 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AP000870.1-201ENST00000472927 406 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC027575.1-201ENST00000481064 460 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RPL17P19-201ENST00000489069 552 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RPS29P21-201ENST00000496272 170 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 RNU6-507P-201ENST00000516045 100 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 SNORA25.14-201ENST00000516481 132 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 FRG2DP-202ENST00000566967 323 ntBASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NUP54Q7Z3B4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 RNU1-139P-201ENST00000391307 165 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 MTCYBP4-201ENST00000401524 249 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 SNORA11.2-201ENST00000408318 127 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.646-201ENST00000410980 101 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 RPL23AP50-201ENST00000434149 455 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC010531.2-201ENST00000465012 153 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC114982.1-201ENST00000469402 321 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC067942.3-201ENST00000512025 362 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC093303.1-201ENST00000514549 295 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 RNU2-34P-201ENST00000516534 121 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 IGKV3-31-201ENST00000523109 329 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 HSBP1P1-201ENST00000555205 166 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 UBL5P4-201ENST00000562584 236 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 MIR3169-201ENST00000578032 83 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 SNORD11B-201ENST00000607707 90 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC133104.2-201ENST00000615272 193 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AL590240.4-201ENST00000616908 390 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC008873.1-201ENST00000625051 138 ntBASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NUP54Q7Z3B4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 Y_RNA.364-201ENST00000365532 101 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 SNORA67.2-201ENST00000384300 149 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 MIR10B-201ENST00000385011 110 ntBASIC1.89□□□□□ -2.11
NUP54Q7Z3B4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms