Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MIR32-201ENST00000384965 70 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-308P-201ENST00000390957 107 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 SNORA12.2-201ENST00000391040 156 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 MTCYBP2-201ENST00000407745 171 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 MTCO2P27-201ENST00000420740 428 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RPL23AP50-201ENST00000434149 455 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 U8.22-201ENST00000459141 133 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-991P-201ENST00000516168 107 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-699P-201ENST00000517081 110 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 CYP4A27P-201ENST00000567218 190 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 AC016727.2-201ENST00000603988 621 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 MIR7843-201ENST00000622274 79 ntBASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDHR3Q6ZTQ4 RNU6-222P-201ENST00000362438 107 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 SNORD32B-201ENST00000364460 84 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 SNORD42.2-201ENST00000365570 69 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 MIR208B-201ENST00000401172 77 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AC004866.1-201ENST00000411748 78 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AC236972.2-201ENST00000434979 310 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 CHEK2P4-201ENST00000450340 246 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 snoU13.30-201ENST00000458951 104 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AL590705.4-201ENST00000532209 134 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 UBL5P4-201ENST00000562584 236 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 MIR3923-201ENST00000579521 83 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 AL160413.1-201ENST00000622780 310 ntBASIC1.9□□□□□ -2.11
CDHR3Q6ZTQ4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 Y_RNA.146-201ENST00000363549 102 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 RNU4-9P-201ENST00000364951 139 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-474P-201ENST00000384243 107 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 SRIP3-201ENST00000413200 219 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 RPL17P19-201ENST00000489069 552 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 HMGN1P13-201ENST00000505795 138 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC027288.2-201ENST00000553028 243 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AL080274.1-201ENST00000605565 220 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC005520.5-201ENST00000613926 164 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 AC090574.1-201ENST00000623186 233 ntBASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDHR3Q6ZTQ4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 ZNF72P-201ENST00000425869 1908 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-17P-201ENST00000384245 107 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 RNU6-18P-201ENST00000384527 107 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AL354751.2-201ENST00000415471 210 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC096644.2-201ENST00000429278 159 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC016256.1-201ENST00000547971 354 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC087588.2-201ENST00000617667 426 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 MTND5P10-201ENST00000603719 1809 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
CDHR3Q6ZTQ4 AC245060.5-201ENST00000610778 3293 ntBASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AC092423.1-201ENST00000430165 186 ntBASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.87□□□□□ -2.11
CDHR3Q6ZTQ4 Y_RNA.639-201ENST00000458981 102 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms