Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 uc_338.14-201ENST00000613162 166 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 MIR3658-201ENST00000636291 56 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 AL353746.1-201ENST00000566293 6881 ntBASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF111Q6ZNA4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 SNORA48.5-201ENST00000391143 135 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 DBIP2-201ENST00000419076 262 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC097463.2-201ENST00000421074 142 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC109810.1-201ENST00000534066 224 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC025754.2-201ENST00000606491 432 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC090517.3-201ENST00000625170 141 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 AC010332.2-201ENST00000613083 1904 ntBASIC3.28□□□□□ -1.88
RNF111Q6ZNA4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
RNF111Q6ZNA4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.89
RNF111Q6ZNA4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 Y_RNA.172-201ENST00000363765 102 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 Y_RNA.361-201ENST00000365515 120 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 RNU6-1168P-201ENST00000390831 104 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AC006461.1-201ENST00000412637 326 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 SNORA31.1-201ENST00000515993 133 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 SNORA70.12-201ENST00000516084 153 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 SNORA31.5-201ENST00000516190 133 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 RPL30P11-203ENST00000598995 310 ntBASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF111Q6ZNA4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 SNORA20-201ENST00000384662 132 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR586-201ENST00000385035 97 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR616-201ENST00000385293 97 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MT-TT-201ENST00000387460 66 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR670-201ENST00000390142 98 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 EIF4EP4-201ENST00000424916 578 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 HSPE1P21-201ENST00000438283 308 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AL121914.1-201ENST00000450188 156 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AL137159.1-201ENST00000452808 512 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 SNRPGP3-201ENST00000469405 227 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AC093663.1-201ENST00000497190 394 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR449C-201ENST00000516047 92 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AC008739.2-201ENST00000597006 317 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MIR92B-201ENST00000607575 96 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AC073476.4-201ENST00000628409 72 ntBASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RNF111Q6ZNA4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 SNORD32B-201ENST00000364460 84 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 SNORA51.4-201ENST00000364993 124 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 SNORA40-201ENST00000388090 126 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MIR526A2-201ENST00000390198 65 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MIR513C-201ENST00000401352 84 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MIR1185-2-201ENST00000408687 86 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 RPL30P13-201ENST00000418873 348 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 HMGN2P9-201ENST00000476875 229 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AC092185.1-201ENST00000491371 97 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MIR4444-1-201ENST00000581696 74 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 MIR4444-2-201ENST00000584390 74 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF111Q6ZNA4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms