Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 SNORD2.1-201ENST00000458762 69 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 Y_RNA.641-201ENST00000459414 105 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 MIR449C-201ENST00000516047 92 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 RNU5F-4P-201ENST00000516581 114 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 RNU6-861P-201ENST00000516745 106 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
E4F1Q66K89 AC023043.3-201ENST00000593113 385 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 snoU18.1-201ENST00000629629 71 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
E4F1Q66K89 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
E4F1Q66K89 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.24□□□□□ -1.89
E4F1Q66K89 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
E4F1Q66K89 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
E4F1Q66K89 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
E4F1Q66K89 SNORA71.3-201ENST00000362582 128 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
E4F1Q66K89 RNU6-1248P-201ENST00000391096 64 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.23□□□□□ -1.89
E4F1Q66K89 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.23□□□□□ -1.89
E4F1Q66K89 SNORA84-201ENST00000459229 133 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
E4F1Q66K89 RNU6-436P-201ENST00000516171 114 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 RN7SKP40-201ENST00000517211 242 ntBASIC3.23□□□□□ -1.89
E4F1Q66K89 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
E4F1Q66K89 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
E4F1Q66K89 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
E4F1Q66K89 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
E4F1Q66K89 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU6-545P-201ENST00000362681 104 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 SNORA62.3-201ENST00000365110 153 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU6-211P-201ENST00000384047 107 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 SNORD15B-201ENST00000384714 146 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU6-493P-201ENST00000391321 108 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 PCNPP3-201ENST00000393579 471 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 YME1L1P1-201ENST00000429435 297 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 TOMM22P2-201ENST00000430735 237 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.22□□□□□ -1.89
E4F1Q66K89 RN7SL297P-201ENST00000483161 293 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.22□□□□□ -1.89
E4F1Q66K89 RNU6-1098P-201ENST00000516772 96 ntBASIC3.22□□□□□ -1.89
E4F1Q66K89 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.22□□□□□ -1.89
E4F1Q66K89 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
E4F1Q66K89 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
E4F1Q66K89 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
E4F1Q66K89 RNU6-682P-201ENST00000363843 106 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 SNORD32B-201ENST00000364460 84 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 RNU6-1027P-201ENST00000383998 107 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 MIR200C-201ENST00000384980 68 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
E4F1Q66K89 RN7SL504P-201ENST00000494496 287 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.21□□□□□ -1.9
E4F1Q66K89 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.21□□□□□ -1.9
E4F1Q66K89 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.21□□□□□ -1.9
E4F1Q66K89 MIR5680-201ENST00000577577 84 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.21□□□□□ -1.9
E4F1Q66K89 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.21□□□□□ -1.9
E4F1Q66K89 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
E4F1Q66K89 MIR622-201ENST00000638396 96 ntBASIC3.21□□□□□ -1.9
E4F1Q66K89 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.21□□□□□ -1.9
E4F1Q66K89 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
E4F1Q66K89 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
E4F1Q66K89 RNU6-774P-201ENST00000363238 107 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 U3.8-201ENST00000363675 217 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 Y_RNA.262-201ENST00000364641 102 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 SNORA67.2-201ENST00000384300 149 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 MIR449B-201ENST00000384995 97 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 MIR218-1-201ENST00000384999 110 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 MIR548B-201ENST00000385247 97 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 AL031003.1-201ENST00000404229 172 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
E4F1Q66K89 RPL39P40-201ENST00000445481 146 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 AP005660.1-201ENST00000522972 293 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
E4F1Q66K89 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
E4F1Q66K89 AC072026.1-201ENST00000605023 201 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 RPL17P51-201ENST00000605218 238 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 MIR7515-201ENST00000637837 67 ntBASIC3.2□□□□□ -1.9
E4F1Q66K89 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
E4F1Q66K89 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
E4F1Q66K89 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
E4F1Q66K89 RNU6-1272P-201ENST00000362776 107 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 SNORD115-30-201ENST00000364117 82 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RNU6-1274P-201ENST00000384557 107 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RNU7-14P-201ENST00000459331 62 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RPS29P2-201ENST00000479278 136 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 SRIP1-201ENST00000489235 288 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 AC074198.2-201ENST00000508153 258 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
E4F1Q66K89 SCARNA11.3-201ENST00000517276 130 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.19□□□□□ -1.9
E4F1Q66K89 AC009127.3-201ENST00000570531 403 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 AL008718.3-201ENST00000610217 321 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms