Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.78□□□□□ -1.8
RNFT1Q5M7Z0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 MIR448-201ENST00000362131 111 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1099P-201ENST00000363533 107 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 SNORD77.3-201ENST00000391113 65 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 RPS29P7-201ENST00000439662 171 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 RN7SL542P-201ENST00000467147 294 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 RN7SL817P-201ENST00000480777 288 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 MIR3163-201ENST00000581592 73 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 JPX_2.1-201ENST00000614161 69 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 U7.3-201ENST00000616123 62 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNFT1Q5M7Z0 AC016588.2-201ENST00000632484 3021 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU1-133P-201ENST00000364867 167 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 Y_RNA.298-201ENST00000364960 107 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-690P-201ENST00000365242 106 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNA5SP372-201ENST00000390836 115 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-816P-201ENST00000390914 107 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1268P-201ENST00000391214 107 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1239P-201ENST00000391310 107 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 MIR300-201ENST00000401138 83 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 AC004941.2-201ENST00000427009 228 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RPL23AP46-201ENST00000438548 490 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 AL353689.1-201ENST00000438895 199 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 AC006011.1-201ENST00000442758 349 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RPS4XP11-201ENST00000446897 772 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 ABCF2P2-201ENST00000450549 296 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 MIR4286-201ENST00000580651 93 ntBASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RNFT1Q5M7Z0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RNA5SP22-201ENST00000365393 109 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AL359837.1-201ENST00000381357 287 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 SNORD116-22-201ENST00000384430 92 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 MIR1283-1-201ENST00000408494 87 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-938P-201ENST00000411285 103 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RBMY2UP-201ENST00000453474 324 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AC008155.2-201ENST00000464337 397 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RN7SL807P-201ENST00000470923 297 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RPL21P129-201ENST00000491732 478 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AC023632.4-201ENST00000517783 191 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 HSPE1P5-201ENST00000561489 272 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 MIR5197-201ENST00000583721 112 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AC012493.2-201ENST00000595083 291 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AC140113.4-201ENST00000622087 222 ntBASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.75□□□□□ -1.81
RNFT1Q5M7Z0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-655P-201ENST00000362858 107 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 SNORD115-13-201ENST00000363358 82 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 SNORD115-16-201ENST00000363887 82 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 SNORD115-1-201ENST00000364961 82 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-644P-201ENST00000391155 98 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 AL133475.1-201ENST00000404414 305 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-402P-201ENST00000410678 103 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 CYCSP19-201ENST00000411715 316 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 SNORD19.2-201ENST00000516978 73 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 IFITM8P-201ENST00000522529 394 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 AC027419.1-201ENST00000522976 328 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 AC021443.1-201ENST00000604478 211 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms