Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 Y_RNA.364-201ENST00000365532 101 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-611P-201ENST00000384276 104 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AC027124.2-201ENST00000428249 105 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AL353689.1-201ENST00000438895 199 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AL035666.1-201ENST00000446195 348 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 RNU7-87P-201ENST00000459343 62 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AP000870.1-201ENST00000472927 406 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AL163540.1-201ENST00000485382 386 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 RPS29P21-201ENST00000496272 170 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.661-201ENST00000516003 99 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-965P-201ENST00000516721 96 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.711-201ENST00000516993 102 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 SNORD116.3-201ENST00000517176 78 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AP003072.1-201ENST00000531740 145 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AC005562.2-201ENST00000618264 111 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
KRTCAP3Q53RY4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 MTND5P16-201ENST00000460269 1703 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-874P-201ENST00000362390 105 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 SNORA18.2-201ENST00000383865 132 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 SNORA22B-201ENST00000383876 138 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 MIR549A-201ENST00000385268 96 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 USP9YP16-201ENST00000430287 407 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 USP9YP23-201ENST00000455085 407 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 IGKV3-31-201ENST00000523109 329 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 MIR1273D-201ENST00000577266 86 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 AC005296.1-201ENST00000616145 209 ntBASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-222P-201ENST00000362438 107 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNA5SP276-201ENST00000362580 94 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-280P-201ENST00000364145 104 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNY1P14-201ENST00000384426 108 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 SNORA69.1-201ENST00000390904 137 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-159P-201ENST00000391080 106 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU1-139P-201ENST00000391307 165 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNA5SP450-201ENST00000411206 102 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC144568.1-201ENST00000520139 137 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 AC007485.1-201ENST00000616755 206 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 MIR7843-201ENST00000622274 79 ntBASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTCAP3Q53RY4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 RNU1-76P-201ENST00000362903 159 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 RNY3P11-201ENST00000364153 102 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 SNORD114-30-201ENST00000364448 72 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 Y_RNA.358-201ENST00000365491 99 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 RNU6-245P-201ENST00000384020 107 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AL445305.1-201ENST00000432577 575 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC004386.2-201ENST00000441858 148 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 CHEK2P4-201ENST00000450340 246 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 RPS23P5-201ENST00000495419 428 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 RNU2-44P-201ENST00000516795 194 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 DEFB131C-201ENST00000528817 165 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC090617.3-201ENST00000573670 475 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 MIR5006-201ENST00000583027 110 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC022432.1-201ENST00000595739 310 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AL109918.3-201ENST00000603072 338 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 TCL6_2.1-201ENST00000615162 119 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AL132822.1-201ENST00000617063 513 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC087588.2-201ENST00000617667 426 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTCAP3Q53RY4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTCAP3Q53RY4 RNA5SP432-201ENST00000362480 116 ntBASIC2.15□□□□□ -2.07
KRTCAP3Q53RY4 Y_RNA.80-201ENST00000362996 102 ntBASIC2.15□□□□□ -2.07
KRTCAP3Q53RY4 SNORA63-201ENST00000363450 132 ntBASIC2.15□□□□□ -2.07
KRTCAP3Q53RY4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms