Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC027288.2-201ENST00000553028 243 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RPS29P30-201ENST00000600975 111 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AC005336.3-201ENST00000623833 2679 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-222P-201ENST00000362438 107 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.149-201ENST00000363558 117 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.152-201ENST00000363578 100 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-137P-201ENST00000363680 108 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-574P-201ENST00000384265 107 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-196P-201ENST00000384315 107 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 SNORA51.11-201ENST00000384442 131 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.510-201ENST00000384511 114 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.574-201ENST00000384766 95 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 MIR487A-201ENST00000385009 80 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU1-139P-201ENST00000391307 165 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RPL21P1-201ENST00000399532 476 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 EIF1P2-201ENST00000428233 350 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 IPO7P1-201ENST00000442031 636 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 snoU13.6-201ENST00000458785 104 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AP000870.1-201ENST00000472927 406 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC010469.2-201ENST00000496412 480 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 SNORA4.4-201ENST00000515921 135 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU2-53P-201ENST00000516257 147 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-635P-201ENST00000516651 102 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC034114.1-201ENST00000520293 285 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 MIR3136-201ENST00000583498 78 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 SNORD98-201ENST00000636377 67 ntBASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNAI3Q3KNW1 RNU6-212P-201ENST00000362642 104 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNY3P4-201ENST00000384428 101 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 MIR186-201ENST00000384988 86 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-159P-201ENST00000391080 106 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 USP9YP16-201ENST00000430287 407 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 USP9YP23-201ENST00000455085 407 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-567P-201ENST00000516746 107 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RNU6-58P-201ENST00000517143 103 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 MIR4672-201ENST00000583126 81 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 AL390123.1-201ENST00000603216 237 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RAC1P9-201ENST00000604990 392 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 AC005520.5-201ENST00000613926 164 ntBASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNAI3Q3KNW1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU6-238P-201ENST00000363313 106 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.452-201ENST00000384202 108 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU6-281P-201ENST00000384212 103 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 SNORA67.4-201ENST00000384688 142 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 MIR10B-201ENST00000385011 110 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU6-130P-201ENST00000411112 103 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 EDDM3CP-201ENST00000415977 425 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 ELOCP20-201ENST00000422460 345 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC096638.1-201ENST00000444678 216 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AL121594.1-201ENST00000475906 575 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNA5SP281-201ENST00000516504 135 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 RNU6-897P-201ENST00000517135 105 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC022868.1-201ENST00000517767 391 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 CYP4A27P-201ENST00000567218 190 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AL034555.1-201ENST00000604816 211 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AL121655.1-201ENST00000605811 308 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC010205.1-201ENST00000616668 449 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AC090517.3-201ENST00000625170 141 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNAI3Q3KNW1 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms