Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AL365434.2-201ENST00000607979 234 ntBASIC2.61□□□□□ -1.99
DDR1Q08345 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
DDR1Q08345 MIR6895-201ENST00000613497 78 ntBASIC2.61□□□□□ -1.99
DDR1Q08345 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 SNORD114-19-201ENST00000363072 75 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 Y_RNA.222-201ENST00000364264 102 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 RNU6-806P-201ENST00000365147 105 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 RNU6-933P-201ENST00000384424 107 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 RNU6-847P-201ENST00000411115 108 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 RPL23AP95-201ENST00000426806 265 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.6□□□□□ -1.99
DDR1Q08345 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.6□□□□□ -1.99
DDR1Q08345 DYNLT3P2-201ENST00000442517 295 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.6□□□□□ -1.99
DDR1Q08345 AC112492.4-201ENST00000456549 352 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 RNU6-307P-201ENST00000516743 106 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 AC109329.1-201ENST00000518744 317 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 CBX3P8-201ENST00000532412 525 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 GNAI2P1-201ENST00000541815 315 ntBASIC2.6□□□□□ -1.99
DDR1Q08345 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.6□□□□□ -1.99
DDR1Q08345 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDR1Q08345 RNU1-115P-201ENST00000365329 160 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 MT-TW-201ENST00000387382 68 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 RNU6-101P-201ENST00000410323 104 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 RNU2-23P-201ENST00000410545 195 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.59□□□□□ -1.99
DDR1Q08345 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.59□□□□□ -1.99
DDR1Q08345 MTND3P9-201ENST00000429526 346 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 FO393415.2-201ENST00000480085 343 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.59□□□□□ -1.99
DDR1Q08345 AC132942.1-201ENST00000486753 483 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.59□□□□□ -1.99
DDR1Q08345 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.59□□□□□ -1.99
DDR1Q08345 MTND1P19-201ENST00000511780 315 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 HSBP1P1-201ENST00000555205 166 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.59□□□□□ -1.99
DDR1Q08345 AC016727.2-201ENST00000603988 621 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 AL356157.2-201ENST00000605122 111 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 U4atac.1-201ENST00000618345 95 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 AC097372.5-201ENST00000623665 376 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.59□□□□□ -1.99
DDR1Q08345 AL606534.2-204ENST00000635008 178 ntBASIC2.59□□□□□ -1.99
DDR1Q08345 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
DDR1Q08345 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
DDR1Q08345 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
DDR1Q08345 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.60-201ENST00000362831 98 ntBASIC2.58□□□□□ -2
DDR1Q08345 RNU6-595P-201ENST00000363944 107 ntBASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.314-201ENST00000365114 102 ntBASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.461-201ENST00000384263 103 ntBASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.477-201ENST00000384352 108 ntBASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.483-201ENST00000384380 101 ntBASIC2.58□□□□□ -2
DDR1Q08345 Y_RNA.533-201ENST00000384596 114 ntBASIC2.58□□□□□ -2
DDR1Q08345 MIR521-1-201ENST00000384902 87 ntBASIC2.58□□□□□ -2
DDR1Q08345 SNORA48.3-201ENST00000391081 134 ntBASIC2.58□□□□□ -2
DDR1Q08345 SNORA40.18-201ENST00000391200 128 ntBASIC2.58□□□□□ -2
DDR1Q08345 RPL21P1-201ENST00000399532 476 ntBASIC2.58□□□□□ -2
DDR1Q08345 MIR548I3-201ENST00000408378 149 ntBASIC2.58□□□□□ -2
DDR1Q08345 MIR1287-201ENST00000408492 90 ntBASIC2.58□□□□□ -2
DDR1Q08345 MIR548I1-201ENST00000408810 149 ntBASIC2.58□□□□□ -2
DDR1Q08345 RNU2-38P-201ENST00000410856 79 ntBASIC2.58□□□□□ -2
DDR1Q08345 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.58□□□□□ -2
DDR1Q08345 AL591043.1-201ENST00000432461 424 ntBASIC2.58□□□□□ -2
DDR1Q08345 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
DDR1Q08345 AC023157.2-201ENST00000540596 141 ntBASIC2.58□□□□□ -2
DDR1Q08345 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.58□□□□□ -2
DDR1Q08345 RPS15AP11-201ENST00000594193 385 ntBASIC2.58□□□□□ -2
DDR1Q08345 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
DDR1Q08345 MTND5P9-201ENST00000503854 1755 ntBASIC2.58□□□□□ -2
DDR1Q08345 ZNF720P1-201ENST00000562403 1939 ntBASIC2.58□□□□□ -2
DDR1Q08345 ZNF299P-201ENST00000406845 1804 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6-874P-201ENST00000362390 105 ntBASIC2.57□□□□□ -2
DDR1Q08345 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6-527P-201ENST00000363425 104 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6-209P-201ENST00000384118 107 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6-1072P-201ENST00000384703 107 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6-443P-201ENST00000384780 107 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNA5SP390-201ENST00000410191 113 ntBASIC2.57□□□□□ -2
DDR1Q08345 RNU4-61P-201ENST00000411243 107 ntBASIC2.57□□□□□ -2
DDR1Q08345 AC138623.1-201ENST00000418060 216 ntBASIC2.57□□□□□ -2
DDR1Q08345 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
DDR1Q08345 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.57□□□□□ -2
DDR1Q08345 HMGB3P17-201ENST00000504195 649 ntBASIC2.57□□□□□ -2
DDR1Q08345 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.57□□□□□ -2
DDR1Q08345 AC090897.2-201ENST00000581715 130 ntBASIC2.57□□□□□ -2
DDR1Q08345 AC125232.2-201ENST00000592457 143 ntBASIC2.57□□□□□ -2
DDR1Q08345 MIR8062-201ENST00000621515 85 ntBASIC2.57□□□□□ -2
DDR1Q08345 SNORA43.4-201ENST00000629559 138 ntBASIC2.57□□□□□ -2
DDR1Q08345 MIR4272-201ENST00000635924 64 ntBASIC2.57□□□□□ -2
DDR1Q08345 Z82209.1-201ENST00000422141 2135 ntBASIC2.56□□□□□ -2
DDR1Q08345 RNU6-1010P-201ENST00000362757 107 ntBASIC2.56□□□□□ -2
DDR1Q08345 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
DDR1Q08345 Y_RNA.424-201ENST00000384063 103 ntBASIC2.56□□□□□ -2
DDR1Q08345 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.56□□□□□ -2
DDR1Q08345 ELOCP20-201ENST00000422460 345 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms