Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-17P-201ENST00000384245 107 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 RNU6-18P-201ENST00000384527 107 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 MIR29B2-201ENST00000385055 81 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 RNA5SP494-201ENST00000410653 129 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AL354751.2-201ENST00000415471 210 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AC018865.2-201ENST00000423631 129 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 MTCYBP10-201ENST00000424905 650 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.59□□□□□ -2.15
CKAP4Q07065 MTND1P14-201ENST00000427400 950 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AL353997.1-201ENST00000432936 108 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 MTCYBP6-201ENST00000441810 138 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AL137792.2-201ENST00000443484 235 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.59□□□□□ -2.15
CKAP4Q07065 OR2AQ1P-201ENST00000451972 200 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.59□□□□□ -2.15
CKAP4Q07065 RNU6-976P-201ENST00000516086 111 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.59□□□□□ -2.15
CKAP4Q07065 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.59□□□□□ -2.15
CKAP4Q07065 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.59□□□□□ -2.15
CKAP4Q07065 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.59□□□□□ -2.15
CKAP4Q07065 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 MIR3923-201ENST00000579521 83 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 MIR4719-201ENST00000585233 84 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 PCGEM1.1-201ENST00000613431 131 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AL590808.1-201ENST00000618696 141 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AC090971.5-201ENST00000621102 293 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 uc_338.22-201ENST00000622722 187 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.59□□□□□ -2.16
CKAP4Q07065 Y_RNA.252-201ENST00000364556 101 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 Y_RNA.405-201ENST00000383979 100 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 Y_RNA.451-201ENST00000384200 100 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 Y_RNA.524-201ENST00000384564 100 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 SNORA8-201ENST00000384574 139 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 Y_RNA.561-201ENST00000384694 100 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 Y_RNA.577-201ENST00000384794 101 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 MIR518A2-201ENST00000384966 87 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 RN7SKP192-201ENST00000411291 327 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 MTCO3P29-201ENST00000432119 779 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.58□□□□□ -2.16
CKAP4Q07065 CYP2C59P-201ENST00000457790 269 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 MIR2053-201ENST00000459295 91 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AC007215.1-201ENST00000464893 276 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AC140059.1-201ENST00000489238 361 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.58□□□□□ -2.16
CKAP4Q07065 SNORA4.4-201ENST00000515921 135 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 RNU6-699P-201ENST00000517081 110 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 RNU6-264P-201ENST00000517134 104 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.58□□□□□ -2.16
CKAP4Q07065 MIR7974-201ENST00000615835 79 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 AC134503.1-201ENST00000633048 54 ntBASIC1.58□□□□□ -2.16
CKAP4Q07065 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CKAP4Q07065 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CKAP4Q07065 MIR369-201ENST00000362155 70 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 snoU2_19.1-201ENST00000362361 80 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-874P-201ENST00000362390 105 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU1-62P-201ENST00000362599 164 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 Y_RNA.128-201ENST00000363391 112 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 Y_RNA.138-201ENST00000363462 102 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-137P-201ENST00000363680 108 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 SNORD32B-201ENST00000364460 84 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-99P-201ENST00000364721 107 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-1227P-201ENST00000383981 107 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-474P-201ENST00000384243 107 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-378P-201ENST00000384324 107 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 Y_RNA.496-201ENST00000384444 101 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 MIR153-2-201ENST00000385225 87 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU6-700P-201ENST00000391043 107 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 MRPS18CP6-201ENST00000423587 223 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RPL23AP50-201ENST00000434149 455 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 snoU13.6-201ENST00000458785 104 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 AC145146.1-201ENST00000496370 254 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 CKS1BP2-201ENST00000497342 240 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 RNU7-175P-201ENST00000515915 61 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 AC018630.3-201ENST00000542637 96 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 AC020661.2-201ENST00000560114 134 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.57□□□□□ -2.16
CKAP4Q07065 AC004584.2-201ENST00000570407 410 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 7SK.7-201ENST00000603504 247 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 SNRPGP17-201ENST00000603780 214 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 AL355802.3-201ENST00000607571 545 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 AC100812.1-201ENST00000607622 580 ntBASIC1.57□□□□□ -2.16
CKAP4Q07065 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CKAP4Q07065 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CKAP4Q07065 U3.9-201ENST00000363823 204 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 RNU6-1032P-201ENST00000384100 107 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 Y_RNA.510-201ENST00000384511 114 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 RNU6-1274P-201ENST00000384557 107 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 MIR32-201ENST00000384965 70 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 RNA5SP213-201ENST00000391031 106 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 MIR190B-201ENST00000401119 79 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 RNU6-1156P-201ENST00000410365 100 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 MTCO2P12-201ENST00000427426 682 ntBASIC1.56□□□□□ -2.16
CKAP4Q07065 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.56□□□□□ -2.16
CKAP4Q07065 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms