Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-336P-201ENST00000364891 107 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 RNU2-3P-201ENST00000410144 191 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 RNU6-607P-201ENST00000411283 108 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AC008134.1-201ENST00000420943 193 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 MTATP6P16-201ENST00000434543 526 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AL117351.1-201ENST00000438864 766 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AC104136.1-201ENST00000512969 394 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AL158042.1-201ENST00000605338 460 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 RNU6-88P-201ENST00000606801 100 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 AP002360.4-201ENST00000606980 481 ntBASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.35□□□□□ -2.47
HIST1H1AQ02539 RNU6-560P-201ENST00000364007 108 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 MIR644A-201ENST00000385262 94 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 U8.16-201ENST00000391279 133 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 AC016909.1-201ENST00000415916 166 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 MTND2P3-201ENST00000452458 470 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 AC079395.1-201ENST00000510981 262 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 RNU6-334P-201ENST00000517072 102 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 AC009712.1-201ENST00000564938 316 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 7SK.7-201ENST00000603504 247 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 AC072039.2-201ENST00000608883 439 ntBASIC-0.36□□□□□ -2.47
HIST1H1AQ02539 U8.7-201ENST00000364940 136 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 MTND4P3-201ENST00000417829 541 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 USP9YP21-201ENST00000420603 432 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AL139396.1-201ENST00000421137 167 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC005534.2-201ENST00000431047 433 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 SNAP23P1-201ENST00000433229 246 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC008628.2-201ENST00000502605 298 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 RNU7-128P-201ENST00000517247 62 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC026470.2-201ENST00000561492 181 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 MIR544B-201ENST00000582372 78 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC104695.3-201ENST00000604052 296 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC108747.1-201ENST00000609508 535 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC005562.2-201ENST00000618264 111 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 AC067863.3-201ENST00000624172 122 ntBASIC-0.37□□□□□ -2.47
HIST1H1AQ02539 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 SNORA25.3-201ENST00000363205 127 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 RNU6-679P-201ENST00000391003 106 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 SNORD83.1-201ENST00000411362 77 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 AC012306.1-201ENST00000423267 114 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 RPL17P35-201ENST00000432217 549 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 AP000870.1-201ENST00000472927 406 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 MTND3P25-201ENST00000509243 135 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 MIR3612-201ENST00000579753 87 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 MIR1295B-201ENST00000636144 60 ntBASIC-0.38□□□□□ -2.47
HIST1H1AQ02539 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 SNORD118-201ENST00000363593 134 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 SNORD113.3-201ENST00000364630 78 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RNU6-224P-201ENST00000384055 107 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 SNORA36A-201ENST00000384221 132 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 MIR214-201ENST00000385214 110 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RPS29P13-201ENST00000402041 169 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RNA5SP127-201ENST00000411051 133 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 CALM2P2-201ENST00000428512 440 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 AC013470.1-201ENST00000453438 462 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 HMGN1P10-201ENST00000474557 553 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RPL23AP91-201ENST00000569211 455 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 SNORA25.18-201ENST00000607153 114 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 AC008250.2-201ENST00000615261 205 ntBASIC-0.39□□□□□ -2.47
HIST1H1AQ02539 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 MIR586-201ENST00000385035 97 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AL606489.2-201ENST00000433886 234 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNU7-12P-201ENST00000516030 62 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNU7-99P-201ENST00000516271 62 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNA5SP480-201ENST00000516840 109 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 RNU11-2P-201ENST00000516898 142 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AP003049.1-201ENST00000529418 457 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AC073539.2-201ENST00000597113 165 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 AL117336.2-201ENST00000602435 335 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 uc_338.16-201ENST00000621804 95 ntBASIC-0.4□□□□□ -2.47
HIST1H1AQ02539 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 MTND4P15-201ENST00000437913 1033 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 MTND1P12-201ENST00000455231 147 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 AC025647.1-201ENST00000517879 253 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 AC131235.4-201ENST00000609288 620 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 AL357075.2-201ENST00000614906 189 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 AL109933.3-201ENST00000619095 188 ntBASIC-0.41□□□□□ -2.48
HIST1H1AQ02539 RNU6-428P-201ENST00000362942 107 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms