Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 AC015688.6-201ENST00000577737 104 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 Z98751.3-201ENST00000604447 521 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 AL451064.1-201ENST00000607718 471 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 MIR26B-201ENST00000362251 77 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU6-45P-201ENST00000384471 107 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 MTCO2P3-201ENST00000442543 421 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 ZNF114P1-201ENST00000453500 292 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU7-14P-201ENST00000459331 62 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 SNORD11.1-201ENST00000459482 85 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU6-1146P-201ENST00000516282 102 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNA5SP481-201ENST00000516814 122 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RRN3P3-201ENST00000549207 578 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 MIR4775-201ENST00000581168 75 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 MIR4753-201ENST00000585119 83 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 AC091805.2-201ENST00000603848 235 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.49□□□□□ -2.33
CACNA1BQ00975 RNU1-76P-201ENST00000362903 159 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 U3.9-201ENST00000363823 204 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-505P-201ENST00000384427 107 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 Y_RNA.504-201ENST00000384481 104 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-939P-201ENST00000384634 107 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 MIR548B-201ENST00000385247 97 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-910P-201ENST00000390844 107 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 UBE2D3P4-201ENST00000441973 436 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 HSPE1P13-201ENST00000451143 297 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL133373.1-201ENST00000497098 94 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RN7SKP88-201ENST00000516847 250 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 MIR548AX-201ENST00000580117 73 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 Z99497.2-201ENST00000603634 310 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL513534.2-201ENST00000603836 250 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 7SK.8-201ENST00000612110 250 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 7SK.11-201ENST00000615477 250 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 7SK.13-201ENST00000622040 250 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC009161.2-201ENST00000624626 138 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNY4P34-201ENST00000364779 95 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 SNORA4.2-201ENST00000365313 147 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 SNORA32.2-201ENST00000384049 122 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-903P-201ENST00000391270 109 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNA5SP467-201ENST00000391274 118 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL117342.1-201ENST00000404861 406 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU2-29P-201ENST00000410423 189 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC011233.1-201ENST00000422812 283 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 USP9YP14-201ENST00000430663 563 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 USP9YP28-201ENST00000435142 589 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL031274.1-201ENST00000450334 232 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 OR2AQ1P-201ENST00000451972 200 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU7-125P-201ENST00000458760 62 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 MTND3P3-201ENST00000505004 126 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-322P-201ENST00000516010 103 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNA5SP503-201ENST00000517047 117 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNY1P9-201ENST00000532431 109 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 HSPE1P19-201ENST00000603327 295 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL353149.1-201ENST00000610667 244 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC012676.2-201ENST00000619258 186 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 AC027335.2-201ENST00000624030 375 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1BQ00975 AL390237.1-201ENST00000404226 1415 ntBASIC0.48□□□□□ -2.33
CACNA1BQ00975 RNU6-428P-201ENST00000362942 107 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNA5SP259-201ENST00000365541 109 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-1286P-201ENST00000383871 107 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-1026P-201ENST00000384465 108 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-1065P-201ENST00000384513 106 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 MIR300-201ENST00000401138 83 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 AC098592.1-201ENST00000419352 333 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1BQ00975 snoU13.30-201ENST00000458951 104 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 AF186996.7-201ENST00000492781 209 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-1041P-201ENST00000516254 102 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-165P-201ENST00000517170 99 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 SUMO2P16-201ENST00000519475 264 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.47□□□□□ -2.33
CACNA1BQ00975 MTCO3P23-201ENST00000561363 289 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.47□□□□□ -2.33
CACNA1BQ00975 MIR4709-201ENST00000577272 72 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 AL359697.1-201ENST00000624879 587 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CACNA1BQ00975 Y_RNA.65-201ENST00000362846 100 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-181P-201ENST00000363225 107 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU4-48P-201ENST00000365559 182 ntBASIC0.47□□□□□ -2.33
CACNA1BQ00975 RNU6-606P-201ENST00000384721 111 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms