Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR4753-201ENST00000585119 83 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 AL590240.4-201ENST00000616908 390 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 AL008636.1-201ENST00000625038 1018 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 ZNF355P-201ENST00000427301 3216 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MTND5P16-201ENST00000460269 1703 ntBASIC1.99□□□□□ -2.09
CDK3Q00526 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.98□□□□□ -2.09
CDK3Q00526 Y_RNA.67-201ENST00000362870 100 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU6-23P-201ENST00000363283 107 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU6-280P-201ENST00000364145 104 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU6-99P-201ENST00000364721 107 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 SNORD116-29-201ENST00000384516 83 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR10B-201ENST00000385011 110 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNY4P36-201ENST00000391116 96 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.98□□□□□ -2.09
CDK3Q00526 AC007098.1-201ENST00000420122 367 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.98□□□□□ -2.09
CDK3Q00526 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
CDK3Q00526 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.98□□□□□ -2.09
CDK3Q00526 AC022493.2-201ENST00000506122 481 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU6-344P-201ENST00000516635 111 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU1-117P-201ENST00000517041 158 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 Y_RNA.718-201ENST00000517110 102 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 RNU6-264P-201ENST00000517134 104 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 AC093027.1-201ENST00000546698 429 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR1244-1-201ENST00000612829 85 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 AC084781.2-201ENST00000615568 161 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR1244-3-201ENST00000635744 85 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR1244-2-201ENST00000636449 85 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR1244-4-202ENST00000636813 85 ntBASIC1.98□□□□□ -2.09
CDK3Q00526 MIR340-201ENST00000362125 95 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNU6-874P-201ENST00000362390 105 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNA5SP493-201ENST00000364115 91 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNU6-1305P-201ENST00000364353 104 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 Y_RNA.364-201ENST00000365532 101 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNA5SP465-201ENST00000391195 109 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNA5SP450-201ENST00000411206 102 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AC010531.2-201ENST00000465012 153 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 MTND3P22-201ENST00000510932 243 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 RNU6-1114P-201ENST00000516022 107 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK3Q00526 AC121758.2-201ENST00000553271 193 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CDK3Q00526 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AC005296.1-201ENST00000616145 209 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
CDK3Q00526 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CDK3Q00526 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDK3Q00526 RNU1-62P-201ENST00000362599 164 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 RNU4-73P-201ENST00000363164 141 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 RNU6-727P-201ENST00000363592 107 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 RNU6-418P-201ENST00000384035 107 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 MIR504-201ENST00000385065 83 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 MT-TD-201ENST00000387419 68 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 RNU1-139P-201ENST00000391307 165 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK3Q00526 MTCO2P27-201ENST00000420740 428 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.96□□□□□ -2.1
CDK3Q00526 MTCO1P44-201ENST00000441935 243 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
CDK3Q00526 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
CDK3Q00526 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.96□□□□□ -2.1
CDK3Q00526 LARP7P1-201ENST00000605576 316 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 SNORD11B-201ENST00000607707 90 ntBASIC1.96□□□□□ -2.1
CDK3Q00526 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDK3Q00526 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDK3Q00526 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.96□□□□□ -2.1
CDK3Q00526 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDK3Q00526 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDK3Q00526 Y_RNA.58-201ENST00000362807 102 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 Y_RNA.154-201ENST00000363624 102 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNU5F-3P-201ENST00000363767 117 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNU6-867P-201ENST00000364956 107 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNY3P1-201ENST00000365085 102 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNY3-201ENST00000365484 102 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNU6-793P-201ENST00000384233 104 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 MIR586-201ENST00000385035 97 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDK3Q00526 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.95□□□□□ -2.1
CDK3Q00526 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.95□□□□□ -2.1
CDK3Q00526 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 ELOCP24-201ENST00000456370 334 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNU1-131P-201ENST00000458943 161 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 SNORD19B-201ENST00000459623 84 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 AC114982.1-201ENST00000469402 321 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 HMGN2P9-201ENST00000476875 229 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 RNU6-470P-201ENST00000515954 104 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CDK3Q00526 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.95□□□□□ -2.1
CDK3Q00526 MIR3169-201ENST00000578032 83 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 MIR4795-201ENST00000584182 89 ntBASIC1.95□□□□□ -2.1
CDK3Q00526 AL078596.1-201ENST00000624856 447 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms