Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MTND3P17-201ENST00000416968 344 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 MTCO2P21-201ENST00000419780 677 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AC008134.1-201ENST00000420943 193 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 MTCO2P23-201ENST00000425216 680 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 USP9YP25-201ENST00000457708 443 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.16□□□□□ -2.38
H3F3AP84243 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.16□□□□□ -2.38
H3F3AP84243 HSPE1P23-201ENST00000509838 286 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.16□□□□□ -2.38
H3F3AP84243 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.16□□□□□ -2.38
H3F3AP84243 AC004832.4-201ENST00000608952 331 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AL096861.1-201ENST00000610899 123 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AL078595.3-201ENST00000623815 1166 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AL138960.2-201ENST00000625145 535 ntBASIC0.16□□□□□ -2.38
H3F3AP84243 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.16□□□□□ -2.38
H3F3AP84243 RNU6-1240P-201ENST00000365155 104 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
H3F3AP84243 Y_RNA.393-201ENST00000383936 102 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 RNU6-1067P-201ENST00000384752 107 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 MIR586-201ENST00000385035 97 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.15□□□□□ -2.39
H3F3AP84243 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.15□□□□□ -2.39
H3F3AP84243 RPL23AP50-201ENST00000434149 455 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AL162725.1-201ENST00000435405 301 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC009237.7-201ENST00000447357 229 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.15□□□□□ -2.39
H3F3AP84243 OR9P1P-201ENST00000496431 281 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.15□□□□□ -2.39
H3F3AP84243 RNU6-1220P-201ENST00000517126 108 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 RNU7-128P-201ENST00000517247 62 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 MTND4LP26-201ENST00000518144 282 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.15□□□□□ -2.39
H3F3AP84243 AC022616.3-201ENST00000523940 148 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 RN7SL793P-201ENST00000583259 296 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC131055.1-201ENST00000584626 316 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AL139418.1-201ENST00000613613 177 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC138649.3-201ENST00000622154 254 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
H3F3AP84243 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC106883.1-201ENST00000418805 562 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC104332.1-201ENST00000440471 797 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 MTCO3P8-201ENST00000453691 755 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC093850.1-201ENST00000454121 251 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.14□□□□□ -2.39
H3F3AP84243 SNORD111.1-201ENST00000516421 86 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 RNU6-1110P-201ENST00000516462 101 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 SCARNA24.1-201ENST00000516465 137 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC025647.1-201ENST00000517879 253 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.14□□□□□ -2.39
H3F3AP84243 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.14□□□□□ -2.39
H3F3AP84243 AC109810.1-201ENST00000534066 224 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 MTND1P15-201ENST00000579262 949 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AP000907.4-201ENST00000604143 237 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 SNORA28-201ENST00000606769 126 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AC104010.1-201ENST00000616889 150 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 AL049777.1-201ENST00000622740 518 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 snoZ196.1-201ENST00000625269 89 ntBASIC0.14□□□□□ -2.39
H3F3AP84243 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.14□□□□□ -2.39
H3F3AP84243 Y_RNA.112-201ENST00000363250 102 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 RNU6-1242P-201ENST00000391052 103 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 Y_RNA.608-201ENST00000410647 95 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 AC004866.1-201ENST00000411748 78 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 AL354692.1-201ENST00000423044 315 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.13□□□□□ -2.39
H3F3AP84243 CALM2P4-201ENST00000430810 426 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 MTCO2P7-201ENST00000446518 666 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.13□□□□□ -2.39
H3F3AP84243 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.13□□□□□ -2.39
H3F3AP84243 AL031667.3-201ENST00000620124 655 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 AL078596.1-201ENST00000624856 447 ntBASIC0.13□□□□□ -2.39
H3F3AP84243 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
H3F3AP84243 Y_RNA.118-201ENST00000363300 101 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNU6-1327P-201ENST00000365302 105 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 SNORA20.2-201ENST00000383922 131 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNU6-157P-201ENST00000383957 107 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 Y_RNA.480-201ENST00000384364 102 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNU6-636P-201ENST00000384598 107 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNA5SP504-201ENST00000410676 117 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 MRPS18CP6-201ENST00000423587 223 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 TPT1P7-201ENST00000458300 517 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AC067940.1-201ENST00000458411 300 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AC022868.1-201ENST00000517767 391 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AP003072.2-201ENST00000527756 676 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AL136317.1-201ENST00000612653 226 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AC009159.2-201ENST00000617603 606 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AC011155.2-201ENST00000623202 216 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 AC022418.1-201ENST00000624118 445 ntBASIC0.12□□□□□ -2.39
H3F3AP84243 RNU6-793P-201ENST00000384233 104 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 MIR140-201ENST00000385282 100 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 RNU7-94P-201ENST00000459576 63 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 MTCO2P6-201ENST00000463134 685 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.11□□□□□ -2.39
H3F3AP84243 AC087854.1-201ENST00000519706 414 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.11□□□□□ -2.39
H3F3AP84243 AC004223.2-201ENST00000590309 544 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 AC002044.1-201ENST00000606707 158 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms