Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.2□□□□□ -2.22
CCNA1P78396 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 MTND1P15-201ENST00000579262 949 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 AC087683.1-201ENST00000591187 441 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 RN7SKP299-201ENST00000606679 301 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 AL357078.3-201ENST00000607528 618 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 AC022079.1-201ENST00000621546 602 ntBASIC1.2□□□□□ -2.22
CCNA1P78396 RNU6-1317P-201ENST00000364582 104 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 RNU6-1093P-201ENST00000391194 107 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 MTND4LP16-201ENST00000440828 295 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 HMGN2P9-201ENST00000476875 229 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 AC091435.1-201ENST00000505442 584 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 RNU6-856P-201ENST00000516959 98 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.19□□□□□ -2.22
CCNA1P78396 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 AL353149.1-201ENST00000610667 244 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 AC005520.5-201ENST00000613926 164 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 AC103705.1-201ENST00000619013 241 ntBASIC1.19□□□□□ -2.22
CCNA1P78396 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-227P-201ENST00000362865 103 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-38P-201ENST00000384085 107 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-1119P-201ENST00000384349 108 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 MIR598-201ENST00000384868 97 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 MIR300-201ENST00000401138 83 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-1037P-201ENST00000459571 107 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 AC025465.4-201ENST00000513422 638 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 SNORA19.2-201ENST00000516013 114 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-1069P-201ENST00000516612 133 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.18□□□□□ -2.22
CCNA1P78396 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.18□□□□□ -2.22
CCNA1P78396 MIR5692C1-201ENST00000585309 91 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 AP001330.5-201ENST00000607176 411 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 AC092807.2-201ENST00000609367 243 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 MIR6857-201ENST00000613267 93 ntBASIC1.18□□□□□ -2.22
CCNA1P78396 FER-210ENST00000628534 558 ntTSL 5 BASIC1.18□□□□□ -2.22
CCNA1P78396 RNU6-545P-201ENST00000362681 104 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 SNORA69-201ENST00000383895 132 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 MIR515-2-201ENST00000384883 83 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 MIR515-1-201ENST00000384884 83 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 MIR549A-201ENST00000385268 96 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.17□□□□□ -2.22
CCNA1P78396 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNA1P78396 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNA1P78396 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNA1P78396 AC083798.1-201ENST00000472671 131 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 RNU6-1041P-201ENST00000516254 102 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC087854.1-201ENST00000519706 414 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC104383.1-201ENST00000530297 370 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.17□□□□□ -2.22
CCNA1P78396 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 CTHRC1P1-201ENST00000605383 469 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC040896.1-201ENST00000613819 479 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 AC068792.1-201ENST00000621354 417 ntBASIC1.17□□□□□ -2.22
CCNA1P78396 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCNA1P78396 Y_RNA.123-201ENST00000363338 102 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RNU6-82P-201ENST00000363970 107 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RNU6-1329P-201ENST00000365664 107 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RNU6-877P-201ENST00000383868 107 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RNY3P9-201ENST00000384727 106 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CCNA1P78396 MRPS10P2-201ENST00000431226 381 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.16□□□□□ -2.22
CCNA1P78396 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.16□□□□□ -2.22
CCNA1P78396 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.16□□□□□ -2.22
CCNA1P78396 RNU6-261P-201ENST00000459506 102 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 U8.21-201ENST00000459536 136 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 SRRM1P2-201ENST00000464531 1192 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.16□□□□□ -2.22
CCNA1P78396 Y_RNA.654-201ENST00000497848 106 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 Y_RNA.688-201ENST00000516565 95 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.16□□□□□ -2.22
CCNA1P78396 MIR4709-201ENST00000577272 72 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AC017083.3-201ENST00000609955 700 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 RMST_3.1-201ENST00000611651 109 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AC012676.2-201ENST00000619258 186 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 MIR6863-201ENST00000636112 90 ntBASIC1.16□□□□□ -2.22
CCNA1P78396 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCNA1P78396 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 RNU6-1322P-201ENST00000364309 107 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 RNU6-418P-201ENST00000384035 107 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 RNU6-968P-201ENST00000384076 107 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 RNU6-342P-201ENST00000384521 104 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 MIR513A1-201ENST00000385138 129 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.15□□□□□ -2.23
CCNA1P78396 RNU6-1208P-201ENST00000459588 107 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
CCNA1P78396 AC092991.1-201ENST00000477176 376 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms