Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR4643-201ENST00000577473 78 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 uc_338.14-201ENST00000613162 166 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 PCGEM1.1-201ENST00000613431 131 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC127459.3-201ENST00000624328 466 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC091564.4-201ENST00000533934 2194 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 U3.9-201ENST00000363823 204 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 DYNLT3P1-201ENST00000378574 347 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.21□□□□□ -1.9
HERVK_113P62684 AC009414.1-201ENST00000427200 443 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.21□□□□□ -1.9
HERVK_113P62684 IFNA11P-201ENST00000446352 526 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
HERVK_113P62684 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 RNU6-182P-201ENST00000516970 105 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 HSPE1P18-201ENST00000517602 280 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.21□□□□□ -1.9
HERVK_113P62684 AC027176.1-201ENST00000560204 514 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 AC055872.1-201ENST00000570978 278 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 AC104984.5-201ENST00000586878 94 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 MIR6715A-201ENST00000615929 79 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.21□□□□□ -1.9
HERVK_113P62684 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HERVK_113P62684 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HERVK_113P62684 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
HERVK_113P62684 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.21□□□□□ -1.9
HERVK_113P62684 AL109809.4-201ENST00000603520 2185 ntBASIC3.21□□□□□ -1.9
HERVK_113P62684 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HERVK_113P62684 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HERVK_113P62684 RNU1-62P-201ENST00000362599 164 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 Y_RNA.274-201ENST00000364714 101 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 Y_RNA.297-201ENST00000364950 91 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 RNA5SP201-201ENST00000410316 124 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.2□□□□□ -1.9
HERVK_113P62684 RAB28P5-201ENST00000427490 651 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AL513328.1-201ENST00000446460 224 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 MRPS10P1-201ENST00000448483 130 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 AC074133.1-201ENST00000515696 183 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 RNU6-107P-201ENST00000516643 102 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.2□□□□□ -1.9
HERVK_113P62684 EIF4A1P12-201ENST00000551910 141 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.2□□□□□ -1.9
HERVK_113P62684 AL670379.2-201ENST00000604983 252 ntBASIC3.2□□□□□ -1.9
HERVK_113P62684 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
HERVK_113P62684 Y_RNA.117-201ENST00000363294 101 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 RNA5SP68-201ENST00000363885 119 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 Y_RNA.200-201ENST00000364018 102 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 Y_RNA.383-201ENST00000383855 97 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 MIR1298-201ENST00000408783 112 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 AC097463.2-201ENST00000421074 142 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 PIGPP3-201ENST00000425307 415 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 AC004386.2-201ENST00000441858 148 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
HERVK_113P62684 PRELID3BP1-201ENST00000457142 540 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 SNORA81.3-201ENST00000517283 198 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 AC079598.5-201ENST00000547460 117 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 MIR4765-201ENST00000585007 77 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 AC004467.1-201ENST00000615678 330 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 AC005562.2-201ENST00000618264 111 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
HERVK_113P62684 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HERVK_113P62684 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.19□□□□□ -1.9
HERVK_113P62684 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.18□□□□□ -1.9
HERVK_113P62684 SNORA18.2-201ENST00000383865 132 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 Y_RNA.415-201ENST00000384012 112 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 Y_RNA.446-201ENST00000384178 104 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 SNORA46.1-201ENST00000391069 153 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 SNORD58.1-201ENST00000391313 66 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 MIR1261-201ENST00000408659 82 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
HERVK_113P62684 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC005042.3-201ENST00000453230 174 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 RAC1P5-201ENST00000512182 576 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 RNU1-117P-201ENST00000517041 158 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.18□□□□□ -1.9
HERVK_113P62684 AC026470.2-201ENST00000561492 181 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 MIR5006-201ENST00000583027 110 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.18□□□□□ -1.9
HERVK_113P62684 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC091932.3-201ENST00000624223 323 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
HERVK_113P62684 AL359854.1-201ENST00000614203 1594 ntBASIC3.17□□□□□ -1.9
HERVK_113P62684 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HERVK_113P62684 MIR410-201ENST00000362222 80 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms