Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 MIR558-201ENST00000384920 94 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 RNA5SP95-201ENST00000410319 137 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.21□□□□□ -2.44
LSM3P62310 AC009237.7-201ENST00000447357 229 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 AC116347.2-201ENST00000514912 523 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 RNU7-41P-201ENST00000515917 61 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 RNA5SP454-201ENST00000517231 127 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 AP003049.1-201ENST00000529418 457 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.21□□□□□ -2.44
LSM3P62310 MIR4452-201ENST00000583004 71 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 SNORA28-201ENST00000606769 126 ntBASIC-0.21□□□□□ -2.44
LSM3P62310 AL589743.1-201ENST00000551932 2712 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
LSM3P62310 MIR337-201ENST00000362281 93 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 RNU4-67P-201ENST00000364569 141 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 MIR32-201ENST00000384965 70 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 MIR586-201ENST00000385035 97 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 SNORD111-201ENST00000408139 94 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 RPL22P17-201ENST00000438729 315 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 AC093019.1-201ENST00000443135 252 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.22□□□□□ -2.44
LSM3P62310 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.22□□□□□ -2.44
LSM3P62310 HMGN2P26-201ENST00000463169 339 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 SNORA19.3-201ENST00000516165 130 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 RNU7-99P-201ENST00000516271 62 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 MIR3612-201ENST00000579753 87 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.44
LSM3P62310 U6.73-201ENST00000619194 103 ntBASIC-0.22□□□□□ -2.44
LSM3P62310 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 RNU6-369P-201ENST00000362515 102 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 RNU6-715P-201ENST00000365204 103 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 RNU6-42P-201ENST00000384165 107 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 SNORA67.2-201ENST00000384300 149 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.23□□□□□ -2.45
LSM3P62310 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.23□□□□□ -2.45
LSM3P62310 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.23□□□□□ -2.45
LSM3P62310 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.23□□□□□ -2.45
LSM3P62310 RNU6-221P-201ENST00000459541 99 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AC010587.1-201ENST00000505809 469 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AC074133.1-201ENST00000515696 183 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.23□□□□□ -2.45
LSM3P62310 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.23□□□□□ -2.45
LSM3P62310 FRG2DP-202ENST00000566967 323 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 MIR4290-201ENST00000583807 95 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AL121992.2-201ENST00000606262 256 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
LSM3P62310 AL031667.3-201ENST00000620124 655 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AL008636.1-201ENST00000625038 1018 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 AL445984.1-201ENST00000637834 659 ntBASIC-0.23□□□□□ -2.45
LSM3P62310 MIR1-1-201ENST00000362147 71 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 MIRLET7C-201ENST00000362160 84 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
LSM3P62310 MIR520G-201ENST00000385064 90 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 MIR520H-201ENST00000385126 88 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 SNORA40.8-201ENST00000411034 126 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 AC008134.1-201ENST00000420943 193 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RPS24P1-201ENST00000438550 371 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.24□□□□□ -2.45
LSM3P62310 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 RNA5SP227-201ENST00000516184 113 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.24□□□□□ -2.45
LSM3P62310 AP003181.2-201ENST00000528941 181 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AP003327.1-201ENST00000529684 127 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 AC080013.3-201ENST00000606839 578 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 MIR6504-201ENST00000613520 61 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 RMST_2.1-201ENST00000617263 136 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AC068792.1-201ENST00000621354 417 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.24□□□□□ -2.45
LSM3P62310 MIR371B-201ENST00000638082 66 ntBASIC-0.24□□□□□ -2.45
LSM3P62310 SNORA63.3-201ENST00000362682 132 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 RNU6-137P-201ENST00000363680 108 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 SNORD71-201ENST00000411292 86 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 AL353997.1-201ENST00000432936 108 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 MTATP6P16-201ENST00000434543 526 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.25□□□□□ -2.45
LSM3P62310 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC-0.25□□□□□ -2.45
LSM3P62310 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.25□□□□□ -2.45
LSM3P62310 AC074290.1-201ENST00000448883 135 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.25□□□□□ -2.45
LSM3P62310 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.25□□□□□ -2.45
LSM3P62310 RNU1-117P-201ENST00000517041 158 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 RNU6-323P-201ENST00000521915 107 ntBASIC-0.25□□□□□ -2.45
LSM3P62310 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms