Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHMP4BP1P59074 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 RNU6-1020P-201ENST00000363684 107 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.170-201ENST00000363746 110 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 SNORD87-201ENST00000364849 89 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 RNU6-245P-201ENST00000384020 107 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.498-201ENST00000384460 102 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 MICF-203ENST00000432679 129 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 AL135790.2-201ENST00000437701 267 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 RPL23AP58-201ENST00000440453 469 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 UBE2DNL-203ENST00000474922 222 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4BP1P59074 MTND5P41-201ENST00000517498 206 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.61□□□□□ -1.83
CHMP4BP1P59074 AL008718.3-201ENST00000610217 321 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.61□□□□□ -1.83
CHMP4BP1P59074 AC010329.5-201ENST00000623497 2174 ntBASIC3.61□□□□□ -1.83
CHMP4BP1P59074 AL356274.2-201ENST00000624379 3752 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 RNU6-486P-201ENST00000363116 107 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.308-201ENST00000365043 101 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.500-201ENST00000384466 111 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.597-201ENST00000410463 100 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP4BP1P59074 OOSP1P1-201ENST00000423265 274 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 RNU6-1219P-201ENST00000516143 112 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 RNU6-155P-201ENST00000516347 100 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP4BP1P59074 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.6□□□□□ -1.83
CHMP4BP1P59074 MIR3923-201ENST00000579521 83 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 AC103810.1-201ENST00000579873 453 ntBASIC3.6□□□□□ -1.83
CHMP4BP1P59074 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CHMP4BP1P59074 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4BP1P59074 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP4BP1P59074 RNU6-655P-201ENST00000362858 107 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 RNU6-653P-201ENST00000363074 106 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 SNORA5B-201ENST00000363786 132 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 Y_RNA.233-201ENST00000364407 101 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 SNORA72.2-201ENST00000365028 127 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 RNU6-211P-201ENST00000384047 107 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 SNORA46.1-201ENST00000391069 153 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4BP1P59074 EIF4EP4-201ENST00000424916 578 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 RNU2-12P-201ENST00000517216 168 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AC072026.1-201ENST00000605023 201 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 AC073349.3-201ENST00000617616 186 ntBASIC3.59□□□□□ -1.83
CHMP4BP1P59074 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHMP4BP1P59074 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC092435.3-201ENST00000565538 3654 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNU1-62P-201ENST00000362599 164 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNU6-1210P-201ENST00000363775 107 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNU6-804P-201ENST00000384286 107 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 SNORA12-201ENST00000391162 147 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 MTCO2P33-201ENST00000402100 465 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNU2-54P-201ENST00000410299 190 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AL451074.5-201ENST00000415894 435 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC009963.1-201ENST00000417265 157 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC027124.2-201ENST00000428249 105 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC009969.1-201ENST00000438726 172 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC145146.1-201ENST00000496370 254 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC008885.1-201ENST00000514930 301 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNA5SP217-201ENST00000515959 91 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RNU6-346P-201ENST00000516288 111 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 Y_RNA.703-201ENST00000516846 111 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AL356575.1-201ENST00000603008 283 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AL365265.1-201ENST00000621045 234 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 MIR3674-201ENST00000636576 68 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 AC092593.1-201ENST00000515413 1815 ntBASIC3.58□□□□□ -1.84
CHMP4BP1P59074 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP4BP1P59074 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 SNORA80A-201ENST00000363922 136 ntBASIC3.57□□□□□ -1.84
CHMP4BP1P59074 SNORA18.3-201ENST00000384122 132 ntBASIC3.57□□□□□ -1.84
CHMP4BP1P59074 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 AC004386.2-201ENST00000441858 148 ntBASIC3.57□□□□□ -1.84
CHMP4BP1P59074 HMGB3P3-201ENST00000510526 400 ntBASIC3.57□□□□□ -1.84
CHMP4BP1P59074 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 MIR7106-201ENST00000612419 65 ntBASIC3.57□□□□□ -1.84
CHMP4BP1P59074 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP4BP1P59074 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP4BP1P59074 snoU2_19.1-201ENST00000362361 80 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 Y_RNA.240-201ENST00000364469 95 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 Y_RNA.329-201ENST00000365209 107 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 SNORA18.2-201ENST00000383865 132 ntBASIC3.56□□□□□ -1.84
CHMP4BP1P59074 SNORA67.2-201ENST00000384300 149 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms