Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.2□□□□□ -2.38
HIST1H2BDP58876 Z84480.1-201ENST00000605131 311 ntBASIC0.2□□□□□ -2.38
HIST1H2BDP58876 RMST_3.1-201ENST00000611651 109 ntBASIC0.2□□□□□ -2.38
HIST1H2BDP58876 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 SNORA70B-201ENST00000384210 135 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 Y_RNA.510-201ENST00000384511 114 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 MIR513B-201ENST00000385136 84 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 RNU6-1106P-201ENST00000390845 107 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AL663109.1-201ENST00000411498 844 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 ISCA1P6-201ENST00000427740 390 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 MTND3P9-201ENST00000429526 346 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 UBE2V1P12-201ENST00000503954 474 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AC105417.1-201ENST00000514691 285 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 FABP5P5-201ENST00000515537 406 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 RNU7-12P-201ENST00000516030 62 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 SNORD111.1-201ENST00000516421 86 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 RNU6-113P-201ENST00000516653 101 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 MTND4LP26-201ENST00000518144 282 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 AL117336.2-201ENST00000602435 335 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.19□□□□□ -2.38
HIST1H2BDP58876 MTND4P4-201ENST00000439033 1366 ntBASIC0.19□□□□□ -2.38
HIST1H2BDP58876 RNU6-53P-201ENST00000365367 106 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 SNORA36.2-201ENST00000384004 127 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 SNORA50A-201ENST00000384225 134 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 RNU6-1067P-201ENST00000384752 107 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 MIR320B2-201ENST00000408479 138 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 MIR1185-2-201ENST00000408687 86 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AC004854.1-201ENST00000440356 349 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.18□□□□□ -2.38
HIST1H2BDP58876 RNU6-1037P-201ENST00000459571 107 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AF186996.7-201ENST00000492781 209 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 MIR92B-201ENST00000607575 96 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 AC006566.1-201ENST00000608943 513 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 SEPT14P17-201ENST00000617978 177 ntBASIC0.18□□□□□ -2.38
HIST1H2BDP58876 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
HIST1H2BDP58876 ZNF204P-201ENST00000416749 2397 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 Y_RNA.265-201ENST00000364677 108 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 RNY1P8-201ENST00000383970 114 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 MIR23B-201ENST00000384832 97 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 HMGN1P14-201ENST00000412459 517 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 SSR1P2-201ENST00000415208 787 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 MTCYBP10-201ENST00000424905 650 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.17□□□□□ -2.38
HIST1H2BDP58876 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.17□□□□□ -2.38
HIST1H2BDP58876 ELOCP32-201ENST00000548625 324 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 MIR3682-201ENST00000581338 84 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 FGF7P1-201ENST00000582820 288 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.17□□□□□ -2.38
HIST1H2BDP58876 MIR98-201ENST00000606724 119 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 TUSC7.1-201ENST00000610969 165 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AC122133.1-201ENST00000613964 233 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AC007014.2-201ENST00000615581 479 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AC100810.6-201ENST00000638068 285 ntBASIC0.17□□□□□ -2.38
HIST1H2BDP58876 AL391987.6-201ENST00000305671 199 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 RNU1-17P-201ENST00000363022 152 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 Y_RNA.123-201ENST00000363338 102 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 MIR487A-201ENST00000385009 80 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 SNORA11.2-201ENST00000408318 127 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 OOSP1P1-201ENST00000423265 274 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 MRPS18CP6-201ENST00000423587 223 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 AC009961.2-201ENST00000435771 251 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.16□□□□□ -2.38
HIST1H2BDP58876 RNU6-430P-201ENST00000517078 107 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 AP003716.2-201ENST00000528260 108 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
HIST1H2BDP58876 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.16□□□□□ -2.38
HIST1H2BDP58876 MIR548AB-201ENST00000584917 84 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 FAM106DP-201ENST00000586416 501 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 AL022161.1-201ENST00000604390 213 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 SNORD11B-201ENST00000607707 90 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 U2.17-201ENST00000611454 95 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
HIST1H2BDP58876 MIR6079-201ENST00000635807 62 ntBASIC0.16□□□□□ -2.38
HIST1H2BDP58876 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
HIST1H2BDP58876 AC090625.1-201ENST00000357130 210 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 MIR103A2-201ENST00000362154 78 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 RNU6-137P-201ENST00000363680 108 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 MIR526A1-201ENST00000384897 85 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.15□□□□□ -2.39
HIST1H2BDP58876 RPL31P35-201ENST00000431058 377 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AC093019.1-201ENST00000443135 252 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 RNU7-138P-201ENST00000459479 64 ntBASIC0.15□□□□□ -2.39
HIST1H2BDP58876 AP000870.1-201ENST00000472927 406 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms