Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC016256.1-201ENST00000547971 354 ntBASIC1.11□□□□□ -2.23
VSX2P58304 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.11□□□□□ -2.23
VSX2P58304 AC015688.6-201ENST00000577737 104 ntBASIC1.11□□□□□ -2.23
VSX2P58304 MIR4753-201ENST00000585119 83 ntBASIC1.11□□□□□ -2.23
VSX2P58304 RNU6-89P-201ENST00000606519 100 ntBASIC1.11□□□□□ -2.23
VSX2P58304 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VSX2P58304 Y_RNA.116-201ENST00000363292 103 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
VSX2P58304 Y_RNA.224-201ENST00000364308 111 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU6-1322P-201ENST00000364309 107 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU6-1305P-201ENST00000364353 104 ntBASIC1.1□□□□□ -2.23
VSX2P58304 SNORD116-9-201ENST00000384000 95 ntBASIC1.1□□□□□ -2.23
VSX2P58304 SNORD116-3-201ENST00000384287 95 ntBASIC1.1□□□□□ -2.23
VSX2P58304 SNORD116-7-201ENST00000384404 95 ntBASIC1.1□□□□□ -2.23
VSX2P58304 SNORD116-5-201ENST00000384462 95 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU6-417P-201ENST00000384712 107 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU2-66P-201ENST00000410650 161 ntBASIC1.1□□□□□ -2.23
VSX2P58304 HMGN2P34-201ENST00000437647 269 ntBASIC1.1□□□□□ -2.23
VSX2P58304 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.1□□□□□ -2.23
VSX2P58304 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.1□□□□□ -2.23
VSX2P58304 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.1□□□□□ -2.23
VSX2P58304 AC007215.1-201ENST00000464893 276 ntBASIC1.1□□□□□ -2.23
VSX2P58304 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.1□□□□□ -2.23
VSX2P58304 AC079140.2-201ENST00000506193 142 ntBASIC1.1□□□□□ -2.23
VSX2P58304 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
VSX2P58304 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
VSX2P58304 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
VSX2P58304 AC005668.1-201ENST00000571142 476 ntBASIC1.1□□□□□ -2.23
VSX2P58304 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.1□□□□□ -2.23
VSX2P58304 AC080078.3-201ENST00000605407 463 ntBASIC1.1□□□□□ -2.23
VSX2P58304 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
VSX2P58304 AC124864.2-201ENST00000624736 186 ntBASIC1.1□□□□□ -2.23
VSX2P58304 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
VSX2P58304 AC027514.1-201ENST00000588561 1603 ntBASIC1.1□□□□□ -2.23
VSX2P58304 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VSX2P58304 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
VSX2P58304 SNORD50.1-201ENST00000362987 71 ntBASIC1.09□□□□□ -2.23
VSX2P58304 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
VSX2P58304 Y_RNA.269-201ENST00000364685 89 ntBASIC1.09□□□□□ -2.23
VSX2P58304 RNU6-259P-201ENST00000383999 107 ntBASIC1.09□□□□□ -2.23
VSX2P58304 MIR518E-201ENST00000385252 88 ntBASIC1.09□□□□□ -2.23
VSX2P58304 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
VSX2P58304 RPS26P42-201ENST00000413485 326 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC016909.1-201ENST00000415916 166 ntBASIC1.09□□□□□ -2.23
VSX2P58304 CST2P1-201ENST00000425770 87 ntBASIC1.09□□□□□ -2.23
VSX2P58304 MTATP6P17-201ENST00000431030 672 ntBASIC1.09□□□□□ -2.23
VSX2P58304 MTCO3P29-201ENST00000432119 779 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AL606517.2-201ENST00000442855 241 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC245517.4-201ENST00000448601 281 ntBASIC1.09□□□□□ -2.23
VSX2P58304 RNU7-187P-201ENST00000458985 68 ntBASIC1.09□□□□□ -2.23
VSX2P58304 U8.21-201ENST00000459536 136 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.09□□□□□ -2.23
VSX2P58304 MTND1P35-201ENST00000526739 508 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VSX2P58304 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.09□□□□□ -2.23
VSX2P58304 AL442163.3-201ENST00000554110 156 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.09□□□□□ -2.23
VSX2P58304 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.09□□□□□ -2.23
VSX2P58304 MIR8076-201ENST00000611401 83 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC073534.2-201ENST00000620377 381 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC006001.4-201ENST00000622243 395 ntBASIC1.09□□□□□ -2.23
VSX2P58304 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
VSX2P58304 RNU6-254P-201ENST00000363377 107 ntBASIC1.08□□□□□ -2.24
VSX2P58304 Y_RNA.151-201ENST00000363566 112 ntBASIC1.08□□□□□ -2.24
VSX2P58304 SNORD113-7-201ENST00000363762 77 ntBASIC1.08□□□□□ -2.24
VSX2P58304 RNU6-784P-201ENST00000384330 106 ntBASIC1.08□□□□□ -2.24
VSX2P58304 SNORD116-1-201ENST00000384335 95 ntBASIC1.08□□□□□ -2.24
VSX2P58304 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
VSX2P58304 MTCO3P40-201ENST00000392516 676 ntBASIC1.08□□□□□ -2.24
VSX2P58304 EIF4E2P1-201ENST00000393781 255 ntBASIC1.08□□□□□ -2.24
VSX2P58304 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
VSX2P58304 Y_RNA.615-201ENST00000410769 117 ntBASIC1.08□□□□□ -2.24
VSX2P58304 EBAG9P1-201ENST00000418955 543 ntBASIC1.08□□□□□ -2.24
VSX2P58304 TOMM22P2-201ENST00000430735 237 ntBASIC1.08□□□□□ -2.24
VSX2P58304 Z82188.1-201ENST00000436709 154 ntBASIC1.08□□□□□ -2.24
VSX2P58304 AC009237.7-201ENST00000447357 229 ntBASIC1.08□□□□□ -2.24
VSX2P58304 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.08□□□□□ -2.24
VSX2P58304 snoU13.27-201ENST00000459278 104 ntBASIC1.08□□□□□ -2.24
VSX2P58304 RNU7-57P-201ENST00000459540 60 ntBASIC1.08□□□□□ -2.24
VSX2P58304 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.08□□□□□ -2.24
VSX2P58304 AC091885.1-201ENST00000506658 268 ntBASIC1.08□□□□□ -2.24
VSX2P58304 RNU6-405P-201ENST00000516637 110 ntBASIC1.08□□□□□ -2.24
VSX2P58304 TPRKBP2-201ENST00000565969 475 ntBASIC1.08□□□□□ -2.24
VSX2P58304 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.08□□□□□ -2.24
VSX2P58304 AC100830.2-201ENST00000581636 240 ntBASIC1.08□□□□□ -2.24
VSX2P58304 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
VSX2P58304 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
VSX2P58304 AL353149.1-201ENST00000610667 244 ntBASIC1.08□□□□□ -2.24
VSX2P58304 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.08□□□□□ -2.24
VSX2P58304 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.08□□□□□ -2.24
VSX2P58304 SCARNA4-201ENST00000629045 128 ntBASIC1.08□□□□□ -2.24
VSX2P58304 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.08□□□□□ -2.24
VSX2P58304 ZNF204P-201ENST00000416749 2397 ntBASIC1.08□□□□□ -2.24
VSX2P58304 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
VSX2P58304 snoU2-30.2-201ENST00000362805 70 ntBASIC1.07□□□□□ -2.24
VSX2P58304 RNU6-1252P-201ENST00000363054 104 ntBASIC1.07□□□□□ -2.24
VSX2P58304 RNU6-1085P-201ENST00000363576 107 ntBASIC1.07□□□□□ -2.24
VSX2P58304 Y_RNA.355-201ENST00000365462 98 ntBASIC1.07□□□□□ -2.24
VSX2P58304 RNU6-214P-201ENST00000384130 107 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms