Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC025459.1-201ENST00000504072 156 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 AP003168.1-201ENST00000530091 307 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.61□□□□□ -2.67
CLTCL1P53675 MTND4P21-201ENST00000453886 1357 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU4-16P-201ENST00000364737 141 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU6-843P-201ENST00000384454 104 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.62□□□□□ -2.67
CLTCL1P53675 AC068135.1-201ENST00000446164 246 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RPS23P5-201ENST00000495419 428 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 SNORD111.1-201ENST00000516421 86 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 AC090897.1-201ENST00000580909 226 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 SCARNA4-201ENST00000629045 128 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU6-934P-201ENST00000365154 107 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNA5SP117-201ENST00000365294 118 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 AL592310.1-201ENST00000414330 671 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.62□□□□□ -2.67
CLTCL1P53675 MTND1P33-201ENST00000446251 917 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU6-881P-201ENST00000516813 102 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 AL162424.1-201ENST00000602325 221 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 SUMO2P14-201ENST00000604488 293 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 AL118556.2-201ENST00000614375 824 ntBASIC-1.62□□□□□ -2.67
CLTCL1P53675 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 RNU6-116P-201ENST00000384042 109 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 SNORA12-201ENST00000391162 147 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 MTCO2P23-201ENST00000425216 680 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.63□□□□□ -2.67
CLTCL1P53675 AP000484.1-201ENST00000620067 1252 ntBASIC-1.63□□□□□ -2.67
CLTCL1P53675 SNORD114-25-201ENST00000363742 72 ntBASIC-1.64□□□□□ -2.67
CLTCL1P53675 AC244250.2-201ENST00000418731 148 ntBASIC-1.64□□□□□ -2.67
CLTCL1P53675 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.64□□□□□ -2.67
CLTCL1P53675 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.64□□□□□ -2.67
CLTCL1P53675 AL392103.1-201ENST00000447000 198 ntBASIC-1.64□□□□□ -2.67
CLTCL1P53675 MIR3115-201ENST00000577915 68 ntBASIC-1.64□□□□□ -2.67
CLTCL1P53675 RNA5SP390-201ENST00000410191 113 ntBASIC-1.65□□□□□ -2.67
CLTCL1P53675 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.65□□□□□ -2.67
CLTCL1P53675 OFD1P3Y-201ENST00000453312 783 ntBASIC-1.65□□□□□ -2.67
CLTCL1P53675 RNU6-63P-201ENST00000516690 95 ntBASIC-1.65□□□□□ -2.67
CLTCL1P53675 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.65□□□□□ -2.67
CLTCL1P53675 AC022960.3-201ENST00000619794 441 ntBASIC-1.65□□□□□ -2.67
CLTCL1P53675 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 snoZ40.1-201ENST00000364540 72 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 MIR873-201ENST00000401120 77 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 FABP5P15-201ENST00000453566 214 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.66□□□□□ -2.67
CLTCL1P53675 MIR3152-201ENST00000579801 74 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.66□□□□□ -2.67
CLTCL1P53675 MIR7107-201ENST00000611489 80 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 MIR6507-201ENST00000613630 70 ntBASIC-1.66□□□□□ -2.67
CLTCL1P53675 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 RNU6-487P-201ENST00000365430 104 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 AC010531.2-201ENST00000465012 153 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 RNU6-572P-201ENST00000516724 80 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 AC133485.4-201ENST00000561835 220 ntBASIC-1.66□□□□□ -2.68
CLTCL1P53675 RNU6-212P-201ENST00000362642 104 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 MIR1298-201ENST00000408783 112 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 FCF1P9-201ENST00000412546 282 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 snoU109.2-201ENST00000459316 135 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 AC021146.9-201ENST00000512503 156 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 AC021146.6-201ENST00000514659 117 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 RNA5SP66-201ENST00000517178 101 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 FRG1KP-201ENST00000623592 341 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 SNORD38B-202ENST00000625943 69 ntBASIC-1.67□□□□□ -2.68
CLTCL1P53675 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
CLTCL1P53675 RNU6-878P-201ENST00000384578 110 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 MIR301A-201ENST00000385261 86 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 MIR501-201ENST00000390204 84 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 MLLT10P1-201ENST00000418346 262 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 AC006366.1-201ENST00000422002 759 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 AC007000.2-201ENST00000442564 487 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 RNU6-274P-201ENST00000459566 107 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 AP000870.1-201ENST00000472927 406 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 AC006441.5-201ENST00000612680 209 ntBASIC-1.68□□□□□ -2.68
CLTCL1P53675 RNU6-188P-201ENST00000364207 107 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 MIR204-201ENST00000385200 110 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 RPS20P2-201ENST00000402520 389 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 RPS24P1-201ENST00000438550 371 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 RNA5SP470-201ENST00000516463 106 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 AC024995.1-201ENST00000523014 93 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 BNIP3P30-201ENST00000601184 574 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 AL606834.3-201ENST00000602615 496 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 MTND5P17-201ENST00000418405 1603 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 SEC63P2-201ENST00000503863 1939 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 AL133396.1-201ENST00000432048 687 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 AL050341.1-201ENST00000447743 313 ntBASIC-1.69□□□□□ -2.68
CLTCL1P53675 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.69□□□□□ -2.68
CLTCL1P53675 RN7SKP164-201ENST00000516138 266 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms