Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
LIMK2P53671 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
LIMK2P53671 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
LIMK2P53671 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
LIMK2P53671 AC009541.1-201ENST00000438279 2662 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 SNORA16B-201ENST00000364674 135 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 Y_RNA.364-201ENST00000365532 101 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LIMK2P53671 U8.13-201ENST00000390842 128 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RN7SKP61-201ENST00000410642 295 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AL590556.1-201ENST00000423231 483 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AC078809.1-201ENST00000427601 140 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RPL30P10-201ENST00000488148 337 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.98□□□□□ -2.09
LIMK2P53671 HMGB1P35-201ENST00000503360 598 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 SNORA25.10-201ENST00000515926 124 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RNU6-1045P-201ENST00000516321 107 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RNU4-77P-201ENST00000516692 156 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LIMK2P53671 MRPS36P4-201ENST00000534436 298 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.98□□□□□ -2.09
LIMK2P53671 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.98□□□□□ -2.09
LIMK2P53671 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 MIR4680-201ENST00000580906 66 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 AC092447.9-201ENST00000603395 144 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 SNORA43.4-201ENST00000629559 138 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.98□□□□□ -2.09
LIMK2P53671 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
LIMK2P53671 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LIMK2P53671 RNU6-944P-201ENST00000364023 107 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 MRPL42P3-201ENST00000401492 326 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RNU6-1156P-201ENST00000410365 100 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RNA5SP494-201ENST00000410653 129 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RNU2-48P-201ENST00000410694 191 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC113618.1-201ENST00000416747 285 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.97□□□□□ -2.09
LIMK2P53671 CBX3P6-201ENST00000430257 527 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.97□□□□□ -2.09
LIMK2P53671 AC244670.1-201ENST00000436879 112 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
LIMK2P53671 CHEK2P4-201ENST00000450340 246 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.97□□□□□ -2.09
LIMK2P53671 SNRPGP7-201ENST00000469016 106 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.97□□□□□ -2.09
LIMK2P53671 RNU6-295P-201ENST00000516901 104 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 RNU6-667P-201ENST00000517186 102 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC022616.8-201ENST00000533569 253 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC004584.2-201ENST00000570407 410 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.97□□□□□ -2.09
LIMK2P53671 AL034555.1-201ENST00000604816 211 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 SNORD58B-201ENST00000607313 66 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 MIR1244-1-201ENST00000612829 85 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.97□□□□□ -2.09
LIMK2P53671 MIR1244-3-201ENST00000635744 85 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 SNORD98-201ENST00000636377 67 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 MIR1244-2-201ENST00000636449 85 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 MIR1244-4-202ENST00000636813 85 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LIMK2P53671 AC131280.1-202ENST00000624067 4211 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
LIMK2P53671 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
LIMK2P53671 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
LIMK2P53671 ZNF72P-201ENST00000425869 1908 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LIMK2P53671 RNU6-874P-201ENST00000362390 105 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.80-201ENST00000362996 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.145-201ENST00000363527 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.158-201ENST00000363651 101 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 RNY3P11-201ENST00000364153 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 RNU4-42P-201ENST00000364738 142 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.314-201ENST00000365114 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 AC117470.1-201ENST00000381974 330 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 RNU6-1286P-201ENST00000383871 107 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 RNU6-142P-201ENST00000384019 107 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.485-201ENST00000384395 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Y_RNA.645-201ENST00000391229 102 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 SNORA26.9-201ENST00000391322 122 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 HMGN2P39-201ENST00000398005 273 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 AL358453.1-201ENST00000422522 250 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 MTCO3P29-201ENST00000432119 779 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 Z82188.1-201ENST00000436709 154 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.96□□□□□ -2.1
LIMK2P53671 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.96□□□□□ -2.1
LIMK2P53671 RNU6-548P-201ENST00000517083 115 ntBASIC1.96□□□□□ -2.1
LIMK2P53671 AL590705.4-201ENST00000532209 134 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms