Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL139109.1-201ENST00000455491 297 ntBASIC2.01□□□□□ -2.09
PDX1P52945 U8.22-201ENST00000459141 133 ntBASIC2.01□□□□□ -2.09
PDX1P52945 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
PDX1P52945 AC105758.1-201ENST00000506038 399 ntBASIC2.01□□□□□ -2.09
PDX1P52945 RNU7-193P-201ENST00000516723 65 ntBASIC2.01□□□□□ -2.09
PDX1P52945 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.01□□□□□ -2.09
PDX1P52945 AC026470.2-201ENST00000561492 181 ntBASIC2.01□□□□□ -2.09
PDX1P52945 AC100812.1-201ENST00000607622 580 ntBASIC2.01□□□□□ -2.09
PDX1P52945 AC126177.8-201ENST00000618339 1015 ntBASIC2.01□□□□□ -2.09
PDX1P52945 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.01□□□□□ -2.09
PDX1P52945 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
PDX1P52945 ZNF355P-201ENST00000427301 3216 ntBASIC2□□□□□ -2.09
PDX1P52945 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PDX1P52945 Y_RNA.315-201ENST00000365117 102 ntBASIC2□□□□□ -2.09
PDX1P52945 RNU6-1040P-201ENST00000383974 107 ntBASIC2□□□□□ -2.09
PDX1P52945 SNORA51.11-201ENST00000384442 131 ntBASIC2□□□□□ -2.09
PDX1P52945 RNU6-700P-201ENST00000391043 107 ntBASIC2□□□□□ -2.09
PDX1P52945 MIR190B-201ENST00000401119 79 ntBASIC2□□□□□ -2.09
PDX1P52945 AL357139.1-201ENST00000407792 426 ntBASIC2□□□□□ -2.09
PDX1P52945 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2□□□□□ -2.09
PDX1P52945 CYCSP49-201ENST00000420810 319 ntBASIC2□□□□□ -2.09
PDX1P52945 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2□□□□□ -2.09
PDX1P52945 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
PDX1P52945 RNU7-14P-201ENST00000459331 62 ntBASIC2□□□□□ -2.09
PDX1P52945 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2□□□□□ -2.09
PDX1P52945 AC093303.1-201ENST00000514549 295 ntBASIC2□□□□□ -2.09
PDX1P52945 RNU6-470P-201ENST00000515954 104 ntBASIC2□□□□□ -2.09
PDX1P52945 RNU2-44P-201ENST00000516795 194 ntBASIC2□□□□□ -2.09
PDX1P52945 ANP32BP3-201ENST00000559213 706 ntBASIC2□□□□□ -2.09
PDX1P52945 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2□□□□□ -2.09
PDX1P52945 MIR5006-201ENST00000583027 110 ntBASIC2□□□□□ -2.09
PDX1P52945 7SK.7-201ENST00000603504 247 ntBASIC2□□□□□ -2.09
PDX1P52945 SNRPGP17-201ENST00000603780 214 ntBASIC2□□□□□ -2.09
PDX1P52945 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
PDX1P52945 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDX1P52945 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PDX1P52945 MIR340-201ENST00000362125 95 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNU6-1115P-201ENST00000362490 106 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNU6-545P-201ENST00000362681 104 ntBASIC1.99□□□□□ -2.09
PDX1P52945 Y_RNA.61-201ENST00000362835 102 ntBASIC1.99□□□□□ -2.09
PDX1P52945 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
PDX1P52945 Y_RNA.419-201ENST00000384041 102 ntBASIC1.99□□□□□ -2.09
PDX1P52945 SNORD14D-201ENST00000384390 87 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNU6-541P-201ENST00000384709 110 ntBASIC1.99□□□□□ -2.09
PDX1P52945 Y_RNA.579-201ENST00000390939 94 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNU6-159P-201ENST00000391080 106 ntBASIC1.99□□□□□ -2.09
PDX1P52945 RNA5SP504-201ENST00000410676 117 ntBASIC1.99□□□□□ -2.09
PDX1P52945 SRIP3-201ENST00000413200 219 ntBASIC1.99□□□□□ -2.09
PDX1P52945 MTCYBP10-201ENST00000424905 650 ntBASIC1.99□□□□□ -2.09
PDX1P52945 USP9YP16-201ENST00000430287 407 ntBASIC1.99□□□□□ -2.09
PDX1P52945 AC009237.7-201ENST00000447357 229 ntBASIC1.99□□□□□ -2.09
PDX1P52945 USP9YP23-201ENST00000455085 407 ntBASIC1.99□□□□□ -2.09
PDX1P52945 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.99□□□□□ -2.09
PDX1P52945 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.99□□□□□ -2.09
PDX1P52945 RNA5SP137-201ENST00000516833 135 ntBASIC1.99□□□□□ -2.09
PDX1P52945 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.99□□□□□ -2.09
PDX1P52945 MIR5695-201ENST00000579717 85 ntBASIC1.99□□□□□ -2.09
PDX1P52945 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
PDX1P52945 TCL6_2.1-201ENST00000615162 119 ntBASIC1.99□□□□□ -2.09
PDX1P52945 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
PDX1P52945 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
PDX1P52945 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
PDX1P52945 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.99□□□□□ -2.09
PDX1P52945 MTND5P16-201ENST00000460269 1703 ntBASIC1.99□□□□□ -2.09
PDX1P52945 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PDX1P52945 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PDX1P52945 RNY3P11-201ENST00000364153 102 ntBASIC1.98□□□□□ -2.09
PDX1P52945 Y_RNA.332-201ENST00000365271 113 ntBASIC1.98□□□□□ -2.09
PDX1P52945 Y_RNA.394-201ENST00000383942 103 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RNU1-139P-201ENST00000391307 165 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RNA5SP270-201ENST00000411361 118 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AC236972.2-201ENST00000434979 310 ntBASIC1.98□□□□□ -2.09
PDX1P52945 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
PDX1P52945 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RNU7-87P-201ENST00000459343 62 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RPS23P5-201ENST00000495419 428 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RNU6-1114P-201ENST00000516022 107 ntBASIC1.98□□□□□ -2.09
PDX1P52945 RNA5SP54-201ENST00000516951 92 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.98□□□□□ -2.09
PDX1P52945 SUB1P3-201ENST00000564581 315 ntBASIC1.98□□□□□ -2.09
PDX1P52945 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AC125232.2-201ENST00000592457 143 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AL133255.1-201ENST00000606374 441 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AL050343.2-201ENST00000607338 280 ntBASIC1.98□□□□□ -2.09
PDX1P52945 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.98□□□□□ -2.09
PDX1P52945 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PDX1P52945 MTND5P10-201ENST00000603719 1809 ntBASIC1.97□□□□□ -2.09
PDX1P52945 RNU6-1164P-201ENST00000364428 107 ntBASIC1.97□□□□□ -2.09
PDX1P52945 SNORD31B-201ENST00000364977 69 ntBASIC1.97□□□□□ -2.09
PDX1P52945 HMGN2P39-201ENST00000398005 273 ntBASIC1.97□□□□□ -2.09
PDX1P52945 AC007098.1-201ENST00000420122 367 ntBASIC1.97□□□□□ -2.09
PDX1P52945 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PDX1P52945 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.97□□□□□ -2.09
PDX1P52945 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
PDX1P52945 AC091179.3-201ENST00000474761 144 ntBASIC1.97□□□□□ -2.09
PDX1P52945 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.97□□□□□ -2.09
PDX1P52945 SNORA25.14-201ENST00000516481 132 ntBASIC1.97□□□□□ -2.09
PDX1P52945 RNU6-699P-201ENST00000517081 110 ntBASIC1.97□□□□□ -2.09
PDX1P52945 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms