Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 EIF4A1P12-201ENST00000551910 141 ntBASIC1.61□□□□□ -2.15
EFNA3P52797 MIR4299-201ENST00000577899 72 ntBASIC1.61□□□□□ -2.15
EFNA3P52797 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.61□□□□□ -2.15
EFNA3P52797 AC113139.1-201ENST00000605049 239 ntBASIC1.61□□□□□ -2.15
EFNA3P52797 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
EFNA3P52797 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
EFNA3P52797 Y_RNA.99-201ENST00000363138 105 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNU6-23P-201ENST00000363283 107 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNU6-457P-201ENST00000363999 107 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNU6-174P-201ENST00000410406 106 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNA5SP501-201ENST00000410990 112 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC108667.1-201ENST00000428618 249 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RPL23AP50-201ENST00000434149 455 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AL353689.1-201ENST00000438895 199 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.6□□□□□ -2.15
EFNA3P52797 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.6□□□□□ -2.15
EFNA3P52797 AC079354.2-201ENST00000453523 154 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RPL23AP3-201ENST00000453844 468 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNU7-14P-201ENST00000459331 62 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC087477.1-201ENST00000465747 340 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RPL23AP75-201ENST00000491601 451 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.6□□□□□ -2.15
EFNA3P52797 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.6□□□□□ -2.15
EFNA3P52797 AC005741.1-201ENST00000511094 432 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 RNU5F-4P-201ENST00000516581 114 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.6□□□□□ -2.15
EFNA3P52797 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.6□□□□□ -2.15
EFNA3P52797 MIR5690-201ENST00000583739 73 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC005899.2-201ENST00000584353 90 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC016727.1-205ENST00000605437 569 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC009229.3-201ENST00000608056 282 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 AC005520.5-201ENST00000613926 164 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 SCARNA4-201ENST00000629045 128 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 ZNF299P-201ENST00000406845 1804 ntBASIC1.6□□□□□ -2.15
EFNA3P52797 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
EFNA3P52797 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
EFNA3P52797 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
EFNA3P52797 RNU5B-2P-201ENST00000363036 113 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 Y_RNA.263-201ENST00000364659 114 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 Y_RNA.356-201ENST00000365475 113 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNU6-438P-201ENST00000365561 103 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 SNORA18.2-201ENST00000383865 132 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 Y_RNA.490-201ENST00000384413 102 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 SNORA12.2-201ENST00000391040 156 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNA5SP465-201ENST00000391195 109 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNU6-370P-201ENST00000411008 104 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.59□□□□□ -2.15
EFNA3P52797 TOMM22P6-201ENST00000465035 409 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNU7-175P-201ENST00000515915 61 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNU6-507P-201ENST00000516045 100 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RNU6-559P-201ENST00000516151 98 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 Y_RNA.670-201ENST00000516255 105 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 GNAI2P1-201ENST00000541815 315 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 AC104581.2-201ENST00000572227 430 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.59□□□□□ -2.15
EFNA3P52797 MIR5696-201ENST00000578474 85 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 RPL17P51-201ENST00000605218 238 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 Y_RNA.804-201ENST00000615262 101 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 AC133104.2-201ENST00000615272 193 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.59□□□□□ -2.15
EFNA3P52797 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.59□□□□□ -2.15
EFNA3P52797 MIR1302-1-201ENST00000637932 143 ntBASIC1.59□□□□□ -2.15
EFNA3P52797 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
EFNA3P52797 Y_RNA.70-201ENST00000362886 110 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RNA5SP493-201ENST00000364115 91 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 Y_RNA.387-201ENST00000383918 102 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RNU6-842P-201ENST00000384269 107 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 Y_RNA.473-201ENST00000384333 102 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RNU6-1297P-201ENST00000384415 104 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RNU6-160P-201ENST00000384591 107 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 Y_RNA.533-201ENST00000384596 114 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 MT-TD-201ENST00000387419 68 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 SNORA75.4-201ENST00000391278 119 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 MIR320B2-201ENST00000408479 138 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 Y_RNA.595-201ENST00000410403 105 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RPS26P42-201ENST00000413485 326 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 AC139712.2-201ENST00000424302 339 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 USMG5P1-201ENST00000425964 177 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 OR2AQ1P-201ENST00000451972 200 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 snoU13.30-201ENST00000458951 104 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
EFNA3P52797 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
EFNA3P52797 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.58□□□□□ -2.16
EFNA3P52797 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.58□□□□□ -2.16
EFNA3P52797 RNU6-1198P-201ENST00000516904 67 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.58□□□□□ -2.16
EFNA3P52797 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 AC009994.1-201ENST00000606889 253 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.58□□□□□ -2.16
EFNA3P52797 RMST_6.1-201ENST00000611980 203 ntBASIC1.58□□□□□ -2.16
EFNA3P52797 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.58□□□□□ -2.16
EFNA3P52797 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
EFNA3P52797 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
EFNA3P52797 Y_RNA.474-201ENST00000384341 102 ntBASIC1.57□□□□□ -2.16
EFNA3P52797 MIR32-201ENST00000384965 70 ntBASIC1.57□□□□□ -2.16
EFNA3P52797 AC243428.1-201ENST00000421099 264 ntBASIC1.57□□□□□ -2.16
EFNA3P52797 RPL7P42-201ENST00000481005 679 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms