Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MIR520A-201ENST00000384862 85 ntBASIC1.63□□□□□ -2.15
SMSP52788 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
SMSP52788 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.63□□□□□ -2.15
SMSP52788 BTF3P4-201ENST00000418852 495 ntBASIC1.63□□□□□ -2.15
SMSP52788 AC245047.4-201ENST00000433189 144 ntBASIC1.63□□□□□ -2.15
SMSP52788 AC074290.1-201ENST00000448883 135 ntBASIC1.63□□□□□ -2.15
SMSP52788 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.63□□□□□ -2.15
SMSP52788 AC025465.3-201ENST00000510570 311 ntBASIC1.63□□□□□ -2.15
SMSP52788 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.63□□□□□ -2.15
SMSP52788 AC011406.1-201ENST00000512440 370 ntBASIC1.63□□□□□ -2.15
SMSP52788 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.63□□□□□ -2.15
SMSP52788 MIR5696-201ENST00000578474 85 ntBASIC1.63□□□□□ -2.15
SMSP52788 AC019193.3-201ENST00000609144 554 ntBASIC1.63□□□□□ -2.15
SMSP52788 MIR8074-201ENST00000615081 81 ntBASIC1.63□□□□□ -2.15
SMSP52788 AC068205.3-201ENST00000636385 468 ntBASIC1.63□□□□□ -2.15
SMSP52788 MIR3688-2-201ENST00000636963 87 ntBASIC1.63□□□□□ -2.15
SMSP52788 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMSP52788 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
SMSP52788 RNU4-42P-201ENST00000364738 142 ntBASIC1.62□□□□□ -2.15
SMSP52788 Y_RNA.295-201ENST00000364918 102 ntBASIC1.62□□□□□ -2.15
SMSP52788 RNU6-360P-201ENST00000390944 104 ntBASIC1.62□□□□□ -2.15
SMSP52788 CST2P1-201ENST00000425770 87 ntBASIC1.62□□□□□ -2.15
SMSP52788 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.62□□□□□ -2.15
SMSP52788 RNA5SP384-201ENST00000516615 116 ntBASIC1.62□□□□□ -2.15
SMSP52788 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
SMSP52788 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.62□□□□□ -2.15
SMSP52788 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.62□□□□□ -2.15
SMSP52788 SUB1P3-201ENST00000564581 315 ntBASIC1.62□□□□□ -2.15
SMSP52788 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.62□□□□□ -2.15
SMSP52788 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.62□□□□□ -2.15
SMSP52788 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.62□□□□□ -2.15
SMSP52788 MIR3942-201ENST00000585264 109 ntBASIC1.62□□□□□ -2.15
SMSP52788 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.62□□□□□ -2.15
SMSP52788 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.62□□□□□ -2.15
SMSP52788 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMSP52788 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.62□□□□□ -2.15
SMSP52788 AC010615.1-201ENST00000594254 1764 ntBASIC1.62□□□□□ -2.15
SMSP52788 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
SMSP52788 RNU6-338P-201ENST00000383888 105 ntBASIC1.61□□□□□ -2.15
SMSP52788 RNU6-1013P-201ENST00000384180 107 ntBASIC1.61□□□□□ -2.15
SMSP52788 RNU6-1215P-201ENST00000384441 102 ntBASIC1.61□□□□□ -2.15
SMSP52788 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SMSP52788 SNORA17.3-201ENST00000391159 129 ntBASIC1.61□□□□□ -2.15
SMSP52788 RPL21P111-201ENST00000418453 477 ntBASIC1.61□□□□□ -2.15
SMSP52788 EBAG9P1-201ENST00000418955 543 ntBASIC1.61□□□□□ -2.15
SMSP52788 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
SMSP52788 AC069257.2-201ENST00000441819 155 ntBASIC1.61□□□□□ -2.15
SMSP52788 snoU13.30-201ENST00000458951 104 ntBASIC1.61□□□□□ -2.15
SMSP52788 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
SMSP52788 TRMT112P2-201ENST00000512910 132 ntBASIC1.61□□□□□ -2.15
SMSP52788 Y_RNA.655-201ENST00000515919 96 ntBASIC1.61□□□□□ -2.15
SMSP52788 AP003465.2-201ENST00000602571 373 ntBASIC1.61□□□□□ -2.15
SMSP52788 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.61□□□□□ -2.15
SMSP52788 AC006504.8-201ENST00000621046 635 ntBASIC1.61□□□□□ -2.15
SMSP52788 MIR338-201ENST00000636369 67 ntBASIC1.61□□□□□ -2.15
SMSP52788 RNU1-62P-201ENST00000362599 164 ntBASIC1.6□□□□□ -2.15
SMSP52788 RNU1-96P-201ENST00000364163 162 ntBASIC1.6□□□□□ -2.15
SMSP52788 MIR153-2-201ENST00000385225 87 ntBASIC1.6□□□□□ -2.15
SMSP52788 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
SMSP52788 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.6□□□□□ -2.15
SMSP52788 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
SMSP52788 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.6□□□□□ -2.15
SMSP52788 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.6□□□□□ -2.15
SMSP52788 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.6□□□□□ -2.15
SMSP52788 RNU6-1041P-201ENST00000516254 102 ntBASIC1.6□□□□□ -2.15
SMSP52788 RNU6-58P-201ENST00000517143 103 ntBASIC1.6□□□□□ -2.15
SMSP52788 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
SMSP52788 AL359821.1-201ENST00000605519 182 ntBASIC1.6□□□□□ -2.15
SMSP52788 MIR8081-201ENST00000611533 95 ntBASIC1.6□□□□□ -2.15
SMSP52788 ZNF204P-201ENST00000416749 2397 ntBASIC1.6□□□□□ -2.15
SMSP52788 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SMSP52788 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
SMSP52788 MIR126-201ENST00000362291 85 ntBASIC1.59□□□□□ -2.15
SMSP52788 Y_RNA.6-201ENST00000362350 114 ntBASIC1.59□□□□□ -2.15
SMSP52788 RNU6-1305P-201ENST00000364353 104 ntBASIC1.59□□□□□ -2.15
SMSP52788 Y_RNA.453-201ENST00000384223 109 ntBASIC1.59□□□□□ -2.15
SMSP52788 RNU6-831P-201ENST00000384548 107 ntBASIC1.59□□□□□ -2.15
SMSP52788 MIR515-2-201ENST00000384883 83 ntBASIC1.59□□□□□ -2.15
SMSP52788 MIR515-1-201ENST00000384884 83 ntBASIC1.59□□□□□ -2.15
SMSP52788 MIR32-201ENST00000384965 70 ntBASIC1.59□□□□□ -2.15
SMSP52788 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
SMSP52788 RNU6-1148P-201ENST00000410992 104 ntBASIC1.59□□□□□ -2.15
SMSP52788 MTCO3P29-201ENST00000432119 779 ntBASIC1.59□□□□□ -2.15
SMSP52788 NDUFB4P10-201ENST00000452541 359 ntBASIC1.59□□□□□ -2.15
SMSP52788 RPL26P26-201ENST00000480251 434 ntBASIC1.59□□□□□ -2.15
SMSP52788 RNU6-1146P-201ENST00000516282 102 ntBASIC1.59□□□□□ -2.15
SMSP52788 RNA5SP481-201ENST00000516814 122 ntBASIC1.59□□□□□ -2.15
SMSP52788 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
SMSP52788 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.59□□□□□ -2.15
SMSP52788 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.59□□□□□ -2.15
SMSP52788 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
SMSP52788 AL512598.1-201ENST00000610158 273 ntBASIC1.59□□□□□ -2.15
SMSP52788 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.59□□□□□ -2.15
SMSP52788 Y_RNA.269-201ENST00000364685 89 ntBASIC1.58□□□□□ -2.16
SMSP52788 SNORA72.2-201ENST00000365028 127 ntBASIC1.58□□□□□ -2.16
SMSP52788 Y_RNA.319-201ENST00000365138 92 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNU6-17P-201ENST00000384245 107 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNU6-18P-201ENST00000384527 107 ntBASIC1.58□□□□□ -2.16
SMSP52788 MIR499A-201ENST00000384903 122 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms