Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RPS29P25-201ENST00000481709 171 ntBASIC1.62□□□□□ -2.15
GPC3P51654 Y_RNA.676-201ENST00000516393 96 ntBASIC1.62□□□□□ -2.15
GPC3P51654 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.62□□□□□ -2.15
GPC3P51654 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.62□□□□□ -2.15
GPC3P51654 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.62□□□□□ -2.15
GPC3P51654 POLR3GP2-201ENST00000588366 668 ntBASIC1.62□□□□□ -2.15
GPC3P51654 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.62□□□□□ -2.15
GPC3P51654 AC122108.2-201ENST00000611946 526 ntBASIC1.62□□□□□ -2.15
GPC3P51654 AC002553.4-201ENST00000616896 331 ntBASIC1.62□□□□□ -2.15
GPC3P51654 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
GPC3P51654 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
GPC3P51654 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
GPC3P51654 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
GPC3P51654 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
GPC3P51654 AL159152.1-201ENST00000635019 2587 ntBASIC1.61□□□□□ -2.15
GPC3P51654 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
GPC3P51654 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
GPC3P51654 RNU1-76P-201ENST00000362903 159 ntBASIC1.61□□□□□ -2.15
GPC3P51654 Y_RNA.132-201ENST00000363421 102 ntBASIC1.61□□□□□ -2.15
GPC3P51654 SNORD116-11-201ENST00000383882 92 ntBASIC1.61□□□□□ -2.15
GPC3P51654 RNU6-1093P-201ENST00000391194 107 ntBASIC1.61□□□□□ -2.15
GPC3P51654 RNU6-510P-201ENST00000391239 108 ntBASIC1.61□□□□□ -2.15
GPC3P51654 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AL139396.1-201ENST00000421137 167 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
GPC3P51654 ATP5J2P3-201ENST00000451550 258 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
GPC3P51654 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
GPC3P51654 MTCYBP18-201ENST00000501056 747 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC011352.1-201ENST00000512300 793 ntBASIC1.61□□□□□ -2.15
GPC3P51654 RNU6-864P-201ENST00000516256 108 ntBASIC1.61□□□□□ -2.15
GPC3P51654 RNU6-1198P-201ENST00000516904 67 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.61□□□□□ -2.15
GPC3P51654 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.61□□□□□ -2.15
GPC3P51654 SNORA59B-202ENST00000578183 701 ntBASIC1.61□□□□□ -2.15
GPC3P51654 7SK.7-201ENST00000603504 247 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
GPC3P51654 U6atac.1-201ENST00000616025 117 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC090617.10-201ENST00000624308 134 ntBASIC1.61□□□□□ -2.15
GPC3P51654 AC022513.1-201ENST00000624512 117 ntBASIC1.61□□□□□ -2.15
GPC3P51654 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
GPC3P51654 RNU6-1252P-201ENST00000363054 104 ntBASIC1.6□□□□□ -2.15
GPC3P51654 Y_RNA.164-201ENST00000363709 102 ntBASIC1.6□□□□□ -2.15
GPC3P51654 SNORA36A-201ENST00000384221 132 ntBASIC1.6□□□□□ -2.15
GPC3P51654 RNU6-95P-201ENST00000384697 107 ntBASIC1.6□□□□□ -2.15
GPC3P51654 RNU1-78P-201ENST00000391248 165 ntBASIC1.6□□□□□ -2.15
GPC3P51654 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
GPC3P51654 MIR300-201ENST00000401138 83 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.6□□□□□ -2.15
GPC3P51654 HSPE1P24-201ENST00000450782 238 ntBASIC1.6□□□□□ -2.15
GPC3P51654 OR2AQ1P-201ENST00000451972 200 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC016925.1-201ENST00000458303 298 ntBASIC1.6□□□□□ -2.15
GPC3P51654 RNU7-187P-201ENST00000458985 68 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC005840.1-201ENST00000498412 377 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.6□□□□□ -2.15
GPC3P51654 Y_RNA.675-201ENST00000516389 149 ntBASIC1.6□□□□□ -2.15
GPC3P51654 MIR4421-201ENST00000578133 69 ntBASIC1.6□□□□□ -2.15
GPC3P51654 MIR3672-201ENST00000584290 82 ntBASIC1.6□□□□□ -2.15
GPC3P51654 SNRPGP20-201ENST00000604477 205 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC124303.1-201ENST00000605703 360 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC019193.3-201ENST00000609144 554 ntBASIC1.6□□□□□ -2.15
GPC3P51654 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC006504.8-201ENST00000621046 635 ntBASIC1.6□□□□□ -2.15
GPC3P51654 AC100810.6-201ENST00000638068 285 ntBASIC1.6□□□□□ -2.15
GPC3P51654 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
GPC3P51654 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
GPC3P51654 MIR517A-201ENST00000385001 87 ntBASIC1.59□□□□□ -2.15
GPC3P51654 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.59□□□□□ -2.15
GPC3P51654 MIR548F1-201ENST00000408667 84 ntBASIC1.59□□□□□ -2.15
GPC3P51654 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
GPC3P51654 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.59□□□□□ -2.15
GPC3P51654 C8orf59P1-201ENST00000429930 303 ntBASIC1.59□□□□□ -2.15
GPC3P51654 AC092989.1-201ENST00000481235 277 ntBASIC1.59□□□□□ -2.15
GPC3P51654 AC082651.2-201ENST00000496833 166 ntBASIC1.59□□□□□ -2.15
GPC3P51654 MTCO2P30-201ENST00000503662 364 ntBASIC1.59□□□□□ -2.15
GPC3P51654 RNU6-718P-201ENST00000516166 105 ntBASIC1.59□□□□□ -2.15
GPC3P51654 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.59□□□□□ -2.15
GPC3P51654 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.59□□□□□ -2.15
GPC3P51654 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.59□□□□□ -2.15
GPC3P51654 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.59□□□□□ -2.15
GPC3P51654 SNORA7.1-201ENST00000363750 139 ntBASIC1.58□□□□□ -2.16
GPC3P51654 RNU5F-3P-201ENST00000363767 117 ntBASIC1.58□□□□□ -2.16
GPC3P51654 RNU4-9P-201ENST00000364951 139 ntBASIC1.58□□□□□ -2.16
GPC3P51654 RNU6-360P-201ENST00000390944 104 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC007098.1-201ENST00000420122 367 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC092473.1-201ENST00000441098 221 ntBASIC1.58□□□□□ -2.16
GPC3P51654 FGF7P6-202ENST00000451282 293 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.58□□□□□ -2.16
GPC3P51654 MTND1P11-201ENST00000456661 876 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC007215.1-201ENST00000464893 276 ntBASIC1.58□□□□□ -2.16
GPC3P51654 TRMT112P2-201ENST00000512910 132 ntBASIC1.58□□□□□ -2.16
GPC3P51654 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.58□□□□□ -2.16
GPC3P51654 RNA5SP481-201ENST00000516814 122 ntBASIC1.58□□□□□ -2.16
GPC3P51654 RNA5SP54-201ENST00000516951 92 ntBASIC1.58□□□□□ -2.16
GPC3P51654 RNU1-92P-201ENST00000517017 135 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AF235103.2-201ENST00000525753 346 ntBASIC1.58□□□□□ -2.16
GPC3P51654 MRPS36P4-201ENST00000534436 298 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.58□□□□□ -2.16
GPC3P51654 MIR4781-201ENST00000585250 76 ntBASIC1.58□□□□□ -2.16
GPC3P51654 AC018638.8-201ENST00000588755 281 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms