Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC026782.1-201ENST00000512952 449 ntBASIC1.86□□□□□ -2.11
RAB28P51157 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
RAB28P51157 RNU2-34P-201ENST00000516534 121 ntBASIC1.86□□□□□ -2.11
RAB28P51157 RNU6-344P-201ENST00000516635 111 ntBASIC1.86□□□□□ -2.11
RAB28P51157 CBX3P8-201ENST00000532412 525 ntBASIC1.86□□□□□ -2.11
RAB28P51157 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB28P51157 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
RAB28P51157 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB28P51157 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB28P51157 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB28P51157 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.86□□□□□ -2.11
RAB28P51157 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
RAB28P51157 AL078596.1-201ENST00000624856 447 ntBASIC1.86□□□□□ -2.11
RAB28P51157 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RAB28P51157 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RAB28P51157 MTND4P1-201ENST00000457501 1466 ntBASIC1.86□□□□□ -2.11
RAB28P51157 AL356292.1-201ENST00000283110 373 ntBASIC1.85□□□□□ -2.11
RAB28P51157 Y_RNA.2-201ENST00000362330 96 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-593P-201ENST00000364716 112 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-601P-201ENST00000384540 107 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-1235P-201ENST00000384559 107 ntBASIC1.85□□□□□ -2.11
RAB28P51157 MT-TL1-201ENST00000386347 75 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AL033519.2-201ENST00000403958 392 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.85□□□□□ -2.11
RAB28P51157 RPL37P10-201ENST00000412884 288 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AC060773.1-201ENST00000421698 310 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AL445685.2-201ENST00000422551 342 ntBASIC1.85□□□□□ -2.11
RAB28P51157 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB28P51157 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-498P-201ENST00000459468 107 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-295P-201ENST00000516901 104 ntBASIC1.85□□□□□ -2.11
RAB28P51157 RNU6-548P-201ENST00000517083 115 ntBASIC1.85□□□□□ -2.11
RAB28P51157 AC134698.4-201ENST00000523451 826 ntBASIC1.85□□□□□ -2.11
RAB28P51157 UBL5P4-201ENST00000562584 236 ntBASIC1.85□□□□□ -2.11
RAB28P51157 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
RAB28P51157 SNORD11B-201ENST00000607707 90 ntBASIC1.85□□□□□ -2.11
RAB28P51157 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
RAB28P51157 CENPCP1-201ENST00000533085 2578 ntBASIC1.85□□□□□ -2.11
RAB28P51157 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
RAB28P51157 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RAB28P51157 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
RAB28P51157 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RAB28P51157 RNU6-845P-201ENST00000362578 103 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RNU6-137P-201ENST00000363680 108 ntBASIC1.84□□□□□ -2.11
RAB28P51157 Y_RNA.184-201ENST00000363884 108 ntBASIC1.84□□□□□ -2.11
RAB28P51157 Y_RNA.279-201ENST00000364763 95 ntBASIC1.84□□□□□ -2.11
RAB28P51157 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
RAB28P51157 Y_RNA.490-201ENST00000384413 102 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RNU6-159P-201ENST00000391080 106 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RNU6-1050P-201ENST00000410388 107 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RPL21P111-201ENST00000418453 477 ntBASIC1.84□□□□□ -2.11
RAB28P51157 USMG5P1-201ENST00000425964 177 ntBASIC1.84□□□□□ -2.11
RAB28P51157 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
RAB28P51157 RNU7-57P-201ENST00000459540 60 ntBASIC1.84□□□□□ -2.11
RAB28P51157 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.84□□□□□ -2.11
RAB28P51157 AP000870.1-201ENST00000472927 406 ntBASIC1.84□□□□□ -2.11
RAB28P51157 AC011406.1-201ENST00000512440 370 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
RAB28P51157 Y_RNA.670-201ENST00000516255 105 ntBASIC1.84□□□□□ -2.11
RAB28P51157 RNA5SP384-201ENST00000516615 116 ntBASIC1.84□□□□□ -2.11
RAB28P51157 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
RAB28P51157 AC104581.2-201ENST00000572227 430 ntBASIC1.84□□□□□ -2.11
RAB28P51157 AL355802.3-201ENST00000607571 545 ntBASIC1.84□□□□□ -2.11
RAB28P51157 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
RAB28P51157 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RAB28P51157 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RAB28P51157 Y_RNA.339-201ENST00000365325 102 ntBASIC1.83□□□□□ -2.12
RAB28P51157 RNU2-20P-201ENST00000410425 191 ntBASIC1.83□□□□□ -2.12
RAB28P51157 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
RAB28P51157 RNU6-57P-201ENST00000411348 103 ntBASIC1.83□□□□□ -2.12
RAB28P51157 Y_RNA.708-201ENST00000516950 96 ntBASIC1.83□□□□□ -2.12
RAB28P51157 SNORA31.17-201ENST00000516953 127 ntBASIC1.83□□□□□ -2.12
RAB28P51157 GNAI2P1-201ENST00000541815 315 ntBASIC1.83□□□□□ -2.12
RAB28P51157 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.83□□□□□ -2.12
RAB28P51157 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
RAB28P51157 AC010900.2-201ENST00000604508 210 ntBASIC1.83□□□□□ -2.12
RAB28P51157 AC008873.1-201ENST00000625051 138 ntBASIC1.83□□□□□ -2.12
RAB28P51157 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
RAB28P51157 MTND4P12-201ENST00000498999 1377 ntBASIC1.83□□□□□ -2.12
RAB28P51157 RNU1-62P-201ENST00000362599 164 ntBASIC1.82□□□□□ -2.12
RAB28P51157 Y_RNA.88-201ENST00000363029 99 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNU6-727P-201ENST00000363592 107 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNU6-112P-201ENST00000363599 104 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNU6-280P-201ENST00000364145 104 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
RAB28P51157 Y_RNA.482-201ENST00000384377 111 ntBASIC1.82□□□□□ -2.12
RAB28P51157 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RAB28P51157 U8.13-201ENST00000390842 128 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNA5SP504-201ENST00000410676 117 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RPL31P58-201ENST00000469001 379 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RPL7P42-201ENST00000481005 679 ntBASIC1.82□□□□□ -2.12
RAB28P51157 AC103851.1-201ENST00000506833 274 ntBASIC1.82□□□□□ -2.12
RAB28P51157 RNU6-237P-201ENST00000515985 71 ntBASIC1.82□□□□□ -2.12
RAB28P51157 Y_RNA.706-201ENST00000516933 99 ntBASIC1.82□□□□□ -2.12
RAB28P51157 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
RAB28P51157 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms