Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 NFU1P2-201ENST00000448700 469 ntBASIC1.3□□□□□ -2.2
CASP4P49662 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
CASP4P49662 AC083904.1-201ENST00000487828 231 ntBASIC1.3□□□□□ -2.2
CASP4P49662 AC093852.1-201ENST00000503587 266 ntBASIC1.3□□□□□ -2.2
CASP4P49662 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.3□□□□□ -2.2
CASP4P49662 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.3□□□□□ -2.2
CASP4P49662 RRN3P3-201ENST00000549207 578 ntBASIC1.3□□□□□ -2.2
CASP4P49662 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.3□□□□□ -2.2
CASP4P49662 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
CASP4P49662 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
CASP4P49662 AC126177.8-201ENST00000618339 1015 ntBASIC1.3□□□□□ -2.2
CASP4P49662 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
CASP4P49662 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CASP4P49662 AL391987.6-201ENST00000305671 199 ntBASIC1.29□□□□□ -2.2
CASP4P49662 MIR302D-201ENST00000362275 68 ntBASIC1.29□□□□□ -2.2
CASP4P49662 RNU6-254P-201ENST00000363377 107 ntBASIC1.29□□□□□ -2.2
CASP4P49662 SNORD113-7-201ENST00000363762 77 ntBASIC1.29□□□□□ -2.2
CASP4P49662 MIR586-201ENST00000385035 97 ntBASIC1.29□□□□□ -2.2
CASP4P49662 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.29□□□□□ -2.2
CASP4P49662 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.29□□□□□ -2.2
CASP4P49662 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.29□□□□□ -2.2
CASP4P49662 MTND1P1-201ENST00000445453 368 ntBASIC1.29□□□□□ -2.2
CASP4P49662 MTCO3P8-201ENST00000453691 755 ntBASIC1.29□□□□□ -2.2
CASP4P49662 snoU13.27-201ENST00000459278 104 ntBASIC1.29□□□□□ -2.2
CASP4P49662 TRBVA-201ENST00000498804 316 ntBASIC1.29□□□□□ -2.2
CASP4P49662 AC079140.2-201ENST00000506193 142 ntBASIC1.29□□□□□ -2.2
CASP4P49662 MTND1P35-201ENST00000526739 508 ntBASIC1.29□□□□□ -2.2
CASP4P49662 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.29□□□□□ -2.2
CASP4P49662 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.29□□□□□ -2.2
CASP4P49662 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CASP4P49662 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CASP4P49662 MIR338-201ENST00000636369 67 ntBASIC1.29□□□□□ -2.2
CASP4P49662 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
CASP4P49662 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
CASP4P49662 snoU2-30.2-201ENST00000362805 70 ntBASIC1.28□□□□□ -2.2
CASP4P49662 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
CASP4P49662 Y_RNA.559-201ENST00000384686 107 ntBASIC1.28□□□□□ -2.2
CASP4P49662 MIR548B-201ENST00000385247 97 ntBASIC1.28□□□□□ -2.2
CASP4P49662 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CASP4P49662 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CASP4P49662 Z83846.1-201ENST00000446798 265 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.28□□□□□ -2.2
CASP4P49662 Y_RNA.665-201ENST00000516177 98 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
CASP4P49662 AC016957.1-201ENST00000534895 309 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AC024909.2-201ENST00000553035 286 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AC010525.2-201ENST00000590920 195 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.28□□□□□ -2.2
CASP4P49662 SCARNA4-201ENST00000629045 128 ntBASIC1.28□□□□□ -2.2
CASP4P49662 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.28□□□□□ -2.21
CASP4P49662 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
CASP4P49662 RNU6-908P-201ENST00000410160 94 ntBASIC1.27□□□□□ -2.21
CASP4P49662 AC004866.1-201ENST00000411748 78 ntBASIC1.27□□□□□ -2.21
CASP4P49662 COX6CP10-201ENST00000416832 224 ntBASIC1.27□□□□□ -2.21
CASP4P49662 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.27□□□□□ -2.21
CASP4P49662 Y_RNA.638-201ENST00000459374 113 ntBASIC1.27□□□□□ -2.21
CASP4P49662 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.27□□□□□ -2.21
CASP4P49662 AC099513.1-201ENST00000490423 301 ntBASIC1.27□□□□□ -2.21
CASP4P49662 RPL23AP75-201ENST00000491601 451 ntBASIC1.27□□□□□ -2.21
CASP4P49662 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.27□□□□□ -2.21
CASP4P49662 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.27□□□□□ -2.21
CASP4P49662 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.27□□□□□ -2.21
CASP4P49662 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.27□□□□□ -2.21
CASP4P49662 AC008873.1-201ENST00000625051 138 ntBASIC1.27□□□□□ -2.21
CASP4P49662 MTND5P35-201ENST00000557537 1720 ntBASIC1.26□□□□□ -2.21
CASP4P49662 RNU6-1305P-201ENST00000364353 104 ntBASIC1.26□□□□□ -2.21
CASP4P49662 RNU6-483P-201ENST00000384088 108 ntBASIC1.26□□□□□ -2.21
CASP4P49662 RNU6-1065P-201ENST00000384513 106 ntBASIC1.26□□□□□ -2.21
CASP4P49662 RNU6-780P-201ENST00000391030 104 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
CASP4P49662 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.26□□□□□ -2.21
CASP4P49662 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.26□□□□□ -2.21
CASP4P49662 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AL353572.1-201ENST00000442490 417 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AC016717.1-201ENST00000448918 286 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.26□□□□□ -2.21
CASP4P49662 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.26□□□□□ -2.21
CASP4P49662 RNU7-187P-201ENST00000458985 68 ntBASIC1.26□□□□□ -2.21
CASP4P49662 HMGN2P26-201ENST00000463169 339 ntBASIC1.26□□□□□ -2.21
CASP4P49662 Y_RNA.704-201ENST00000516851 102 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AC024995.1-201ENST00000523014 93 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.26□□□□□ -2.21
CASP4P49662 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.26□□□□□ -2.21
CASP4P49662 MIR4709-201ENST00000577272 72 ntBASIC1.26□□□□□ -2.21
CASP4P49662 MIR3937-201ENST00000580135 106 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AC092954.2-201ENST00000609103 430 ntBASIC1.26□□□□□ -2.21
CASP4P49662 AL078596.1-201ENST00000624856 447 ntBASIC1.26□□□□□ -2.21
CASP4P49662 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.26□□□□□ -2.21
CASP4P49662 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
CASP4P49662 Y_RNA.530-201ENST00000384587 101 ntBASIC1.25□□□□□ -2.21
CASP4P49662 MIR549A-201ENST00000385268 96 ntBASIC1.25□□□□□ -2.21
CASP4P49662 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CASP4P49662 MRPL35P1-201ENST00000404272 572 ntBASIC1.25□□□□□ -2.21
CASP4P49662 MIR1253-201ENST00000408273 105 ntBASIC1.25□□□□□ -2.21
CASP4P49662 HMGN2P34-201ENST00000437647 269 ntBASIC1.25□□□□□ -2.21
CASP4P49662 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.25□□□□□ -2.21
CASP4P49662 RNU6-344P-201ENST00000516635 111 ntBASIC1.25□□□□□ -2.21
CASP4P49662 RNA5SP54-201ENST00000516951 92 ntBASIC1.25□□□□□ -2.21
CASP4P49662 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms