Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RNA5SP213-201ENST00000391031 106 ntBASIC2.3□□□□□ -2.04
CENPAP49450 RNU6-101P-201ENST00000410323 104 ntBASIC2.3□□□□□ -2.04
CENPAP49450 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
CENPAP49450 AC112492.4-201ENST00000456549 352 ntBASIC2.3□□□□□ -2.04
CENPAP49450 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.3□□□□□ -2.04
CENPAP49450 Y_RNA.683-201ENST00000516508 93 ntBASIC2.3□□□□□ -2.04
CENPAP49450 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.3□□□□□ -2.04
CENPAP49450 AP002770.2-201ENST00000543613 532 ntBASIC2.3□□□□□ -2.04
CENPAP49450 LARP7P3-201ENST00000579888 337 ntBASIC2.3□□□□□ -2.04
CENPAP49450 MIR4298-201ENST00000584380 73 ntBASIC2.3□□□□□ -2.04
CENPAP49450 MZT1P2-201ENST00000604387 248 ntBASIC2.3□□□□□ -2.04
CENPAP49450 AC124312.5-201ENST00000604451 268 ntBASIC2.3□□□□□ -2.04
CENPAP49450 U4atac.1-201ENST00000618345 95 ntBASIC2.3□□□□□ -2.04
CENPAP49450 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CENPAP49450 MTND5P35-201ENST00000557537 1720 ntBASIC2.29□□□□□ -2.04
CENPAP49450 Y_RNA.27-201ENST00000362540 103 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
CENPAP49450 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU6-438P-201ENST00000365561 103 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU6-926P-201ENST00000384075 107 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU6-318P-201ENST00000384283 103 ntBASIC2.29□□□□□ -2.04
CENPAP49450 Y_RNA.500-201ENST00000384466 111 ntBASIC2.29□□□□□ -2.04
CENPAP49450 Y_RNA.526-201ENST00000384572 110 ntBASIC2.29□□□□□ -2.04
CENPAP49450 Y_RNA.595-201ENST00000410403 105 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC004866.1-201ENST00000411748 78 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC105272.1-201ENST00000438604 198 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC091179.3-201ENST00000474761 144 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC018868.1-201ENST00000491307 315 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.29□□□□□ -2.04
CENPAP49450 SNORA4.4-201ENST00000515921 135 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
CENPAP49450 RNA5SP490-201ENST00000517141 136 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC040926.1-201ENST00000530195 238 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.29□□□□□ -2.04
CENPAP49450 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
CENPAP49450 ELOCP29-201ENST00000588193 334 ntBASIC2.29□□□□□ -2.04
CENPAP49450 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.29□□□□□ -2.04
CENPAP49450 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CENPAP49450 RNU6-545P-201ENST00000362681 104 ntBASIC2.28□□□□□ -2.04
CENPAP49450 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
CENPAP49450 RNU6-450P-201ENST00000364654 107 ntBASIC2.28□□□□□ -2.04
CENPAP49450 RNY3P4-201ENST00000384428 101 ntBASIC2.28□□□□□ -2.04
CENPAP49450 Y_RNA.527-201ENST00000384573 102 ntBASIC2.28□□□□□ -2.04
CENPAP49450 MIR329-1-201ENST00000385028 80 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AL357139.1-201ENST00000407792 426 ntBASIC2.28□□□□□ -2.04
CENPAP49450 SNORD12B-201ENST00000410433 91 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.28□□□□□ -2.04
CENPAP49450 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
CENPAP49450 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.28□□□□□ -2.04
CENPAP49450 RNU6-344P-201ENST00000516635 111 ntBASIC2.28□□□□□ -2.04
CENPAP49450 RN7SKP49-201ENST00000516675 260 ntBASIC2.28□□□□□ -2.04
CENPAP49450 Y_RNA.721-201ENST00000517207 102 ntBASIC2.28□□□□□ -2.04
CENPAP49450 RRN3P3-201ENST00000549207 578 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.28□□□□□ -2.04
CENPAP49450 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
CENPAP49450 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.28□□□□□ -2.04
CENPAP49450 MIR4680-201ENST00000580906 66 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AC022432.1-201ENST00000595739 310 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AC104695.3-201ENST00000604052 296 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AC025754.2-201ENST00000606491 432 ntBASIC2.28□□□□□ -2.04
CENPAP49450 SNORD11B-201ENST00000607707 90 ntBASIC2.28□□□□□ -2.04
CENPAP49450 AL162373.1-201ENST00000620433 407 ntBASIC2.28□□□□□ -2.04
CENPAP49450 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CENPAP49450 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.28□□□□□ -2.04
CENPAP49450 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CENPAP49450 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.27□□□□□ -2.05
CENPAP49450 RNU6-1305P-201ENST00000364353 104 ntBASIC2.27□□□□□ -2.05
CENPAP49450 MIR606-201ENST00000384851 96 ntBASIC2.27□□□□□ -2.05
CENPAP49450 SNORD78.2-201ENST00000391076 69 ntBASIC2.27□□□□□ -2.05
CENPAP49450 Y_RNA.645-201ENST00000391229 102 ntBASIC2.27□□□□□ -2.05
CENPAP49450 COTL1P1-201ENST00000422309 375 ntBASIC2.27□□□□□ -2.05
CENPAP49450 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
CENPAP49450 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.27□□□□□ -2.05
CENPAP49450 AC025750.2-201ENST00000442609 450 ntBASIC2.27□□□□□ -2.05
CENPAP49450 UQCRBP2-201ENST00000447827 297 ntBASIC2.27□□□□□ -2.05
CENPAP49450 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
CENPAP49450 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.27□□□□□ -2.05
CENPAP49450 SNORD109B-201ENST00000458961 67 ntBASIC2.27□□□□□ -2.05
CENPAP49450 SNORD109A-201ENST00000459128 67 ntBASIC2.27□□□□□ -2.05
CENPAP49450 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.27□□□□□ -2.05
CENPAP49450 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
CENPAP49450 ATP5EP1-201ENST00000510257 156 ntBASIC2.27□□□□□ -2.05
CENPAP49450 RNU6-991P-201ENST00000516168 107 ntBASIC2.27□□□□□ -2.05
CENPAP49450 SCARNA15.1-201ENST00000516384 125 ntBASIC2.27□□□□□ -2.05
CENPAP49450 RNU6-107P-201ENST00000516643 102 ntBASIC2.27□□□□□ -2.05
CENPAP49450 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.27□□□□□ -2.05
CENPAP49450 AL390123.1-201ENST00000603216 237 ntBASIC2.27□□□□□ -2.05
CENPAP49450 SDR42E1P4-201ENST00000620894 481 ntBASIC2.27□□□□□ -2.05
CENPAP49450 AC006386.2-201ENST00000624491 75 ntBASIC2.27□□□□□ -2.05
CENPAP49450 AC012005.1-201ENST00000624575 75 ntBASIC2.27□□□□□ -2.05
CENPAP49450 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CENPAP49450 AC007336.1-201ENST00000576365 3828 ntBASIC2.27□□□□□ -2.05
CENPAP49450 ZNF658B-202ENST00000615961 3375 ntBASIC2.27□□□□□ -2.05
CENPAP49450 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CENPAP49450 RNU6-859P-201ENST00000362728 107 ntBASIC2.26□□□□□ -2.05
CENPAP49450 RNU4-50P-201ENST00000364361 141 ntBASIC2.26□□□□□ -2.05
CENPAP49450 Y_RNA.415-201ENST00000384012 112 ntBASIC2.26□□□□□ -2.05
CENPAP49450 RNU6-1145P-201ENST00000384246 107 ntBASIC2.26□□□□□ -2.05
CENPAP49450 RNU6-611P-201ENST00000384276 104 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms