Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.18□□□□□ -2.22
CXCL12P48061 RNU6-254P-201ENST00000363377 107 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 RNA5SP325-201ENST00000363756 130 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL12P48061 RNU6-1286P-201ENST00000383871 107 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 RNU6-968P-201ENST00000384076 107 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 Y_RNA.436-201ENST00000384097 102 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL12P48061 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 AF186996.7-201ENST00000492781 209 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 MTCO1P29-201ENST00000496868 288 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 SNORA31.17-201ENST00000516953 127 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL12P48061 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL12P48061 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL12P48061 AC026371.1-201ENST00000551867 419 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.18□□□□□ -2.22
CXCL12P48061 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL12P48061 AC146944.4-201ENST00000602697 718 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 DISC2.1-201ENST00000612827 205 ntBASIC1.18□□□□□ -2.22
CXCL12P48061 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
CXCL12P48061 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.18□□□□□ -2.22
CXCL12P48061 MTND5P9-201ENST00000503854 1755 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RNU6-112P-201ENST00000363599 104 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 SNORD113-7-201ENST00000363762 77 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RNU6-1090P-201ENST00000364065 94 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RNU6-418P-201ENST00000384035 107 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AL590002.1-201ENST00000406554 418 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 NCOR1P3-201ENST00000420479 303 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 MTCO1P20-201ENST00000425366 358 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.17□□□□□ -2.22
CXCL12P48061 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 MTCO2P7-201ENST00000446518 666 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RNU7-187P-201ENST00000458985 68 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 HMGN2P26-201ENST00000463169 339 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AC114801.2-201ENST00000503825 781 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 RNU6-506P-201ENST00000516553 94 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RNU6-314P-201ENST00000516574 104 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.17□□□□□ -2.22
CXCL12P48061 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CXCL12P48061 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 AL160236.1-201ENST00000556317 195 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.17□□□□□ -2.22
CXCL12P48061 FGF7P1-201ENST00000582820 288 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 RPL17P51-201ENST00000605218 238 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.17□□□□□ -2.22
CXCL12P48061 MIR8076-201ENST00000611401 83 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.17□□□□□ -2.22
CXCL12P48061 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 AL159152.1-201ENST00000635019 2587 ntBASIC1.17□□□□□ -2.22
CXCL12P48061 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
CXCL12P48061 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL12P48061 RNU6-562P-201ENST00000362731 107 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 RNU6-451P-201ENST00000362921 107 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 Y_RNA.256-201ENST00000364594 104 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 RNU6-877P-201ENST00000383868 107 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 MIR487A-201ENST00000385009 80 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 RNU6-955P-201ENST00000410497 104 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL12P48061 AC099677.2-201ENST00000436385 175 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 AC004386.2-201ENST00000441858 148 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 AC007395.1-201ENST00000451333 677 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.16□□□□□ -2.22
CXCL12P48061 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.16□□□□□ -2.22
CXCL12P48061 SUMO2P18-201ENST00000518873 252 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 ZNF519P2-201ENST00000557032 169 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.16□□□□□ -2.22
CXCL12P48061 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CXCL12P48061 AC005562.2-201ENST00000618264 111 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 AC068205.3-201ENST00000636385 468 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 MIR1321-201ENST00000637766 79 ntBASIC1.16□□□□□ -2.22
CXCL12P48061 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CXCL12P48061 MIR424-201ENST00000362227 98 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 RNU6-862P-201ENST00000362804 105 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 Y_RNA.132-201ENST00000363421 102 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 Y_RNA.151-201ENST00000363566 112 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 RNY3P3-201ENST00000363816 102 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 RNU6-933P-201ENST00000384424 107 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 RNU6-332P-201ENST00000391193 108 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AC004866.1-201ENST00000411748 78 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL12P48061 RPL21P111-201ENST00000418453 477 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AL590632.1-201ENST00000424289 371 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL12P48061 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CXCL12P48061 ATP5J2P3-201ENST00000451550 258 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 MTCO3P8-201ENST00000453691 755 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL12P48061 RNU6-1041P-201ENST00000516254 102 ntBASIC1.15□□□□□ -2.23
CXCL12P48061 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.15□□□□□ -2.23
CXCL12P48061 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms