Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU5F-4P-201ENST00000516581 114 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
NEDD4P46934 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.87□□□□□ -2.11
NEDD4P46934 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.87□□□□□ -2.11
NEDD4P46934 TCL6_2.1-201ENST00000615162 119 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 AC005562.2-201ENST00000618264 111 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 AL008636.1-201ENST00000625038 1018 ntBASIC1.87□□□□□ -2.11
NEDD4P46934 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD4P46934 RNU6-743P-201ENST00000364151 106 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 Y_RNA.384-201ENST00000383909 102 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNU6-17P-201ENST00000384245 107 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNU6-18P-201ENST00000384527 107 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD4P46934 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.86□□□□□ -2.11
NEDD4P46934 Z82188.1-201ENST00000436709 154 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD4P46934 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD4P46934 AC093259.1-201ENST00000509755 300 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNU6-1098P-201ENST00000516772 96 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNU2-44P-201ENST00000516795 194 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNA5SP490-201ENST00000517141 136 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 CBX3P8-201ENST00000532412 525 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.86□□□□□ -2.11
NEDD4P46934 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.86□□□□□ -2.11
NEDD4P46934 AL031274.2-201ENST00000599419 203 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 AC016727.2-201ENST00000603988 621 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 BX248123.2-201ENST00000606318 124 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 AL359314.1-201ENST00000616913 261 ntBASIC1.86□□□□□ -2.11
NEDD4P46934 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NEDD4P46934 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NEDD4P46934 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NEDD4P46934 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NEDD4P46934 Y_RNA.70-201ENST00000362886 110 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 Y_RNA.99-201ENST00000363138 105 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 SNORD31B-201ENST00000364977 69 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 SNORA18.2-201ENST00000383865 132 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 RNU6-245P-201ENST00000384020 107 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 SNORA12.2-201ENST00000391040 156 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD4P46934 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.85□□□□□ -2.11
NEDD4P46934 RNU7-14P-201ENST00000459331 62 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 Y_RNA.676-201ENST00000516393 96 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 RNU6-58P-201ENST00000517143 103 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.85□□□□□ -2.11
NEDD4P46934 MIR5701-3-201ENST00000578890 82 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 MIR5701-1-201ENST00000585138 82 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 AC100812.1-201ENST00000607622 580 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.85□□□□□ -2.11
NEDD4P46934 AL132765.2-201ENST00000610812 351 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 MIR5701-2-201ENST00000615634 82 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.85□□□□□ -2.11
NEDD4P46934 AL669831.3-213ENST00000636676 183 ntBASIC1.85□□□□□ -2.11
NEDD4P46934 MTND5P10-201ENST00000603719 1809 ntBASIC1.84□□□□□ -2.11
NEDD4P46934 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
NEDD4P46934 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.332-201ENST00000365271 113 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU6-438P-201ENST00000365561 103 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.404-201ENST00000383978 102 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.405-201ENST00000383979 100 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.451-201ENST00000384200 100 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.473-201ENST00000384333 102 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU6-1297P-201ENST00000384415 104 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.524-201ENST00000384564 100 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.561-201ENST00000384694 100 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 MIR320A-201ENST00000385302 82 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU6-700P-201ENST00000391043 107 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 MIR300-201ENST00000401138 83 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 SNORD23.1-201ENST00000408212 104 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU4-14P-201ENST00000410858 122 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU6-370P-201ENST00000411008 104 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.12
NEDD4P46934 AC004386.2-201ENST00000441858 148 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 MTND4P17-201ENST00000470444 350 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RPL7P42-201ENST00000481005 679 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC093303.1-201ENST00000514549 295 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU6-277P-201ENST00000516272 106 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC134698.4-201ENST00000523451 826 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.12
NEDD4P46934 AC078899.2-201ENST00000595282 212 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC005014.2-201ENST00000607795 599 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 AC022202.1-201ENST00000613515 211 ntBASIC1.84□□□□□ -2.12
NEDD4P46934 Y_RNA.48-201ENST00000362710 103 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNY1P16-201ENST00000363063 111 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNU6-1188P-201ENST00000363795 107 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNU4-13P-201ENST00000364019 141 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 Y_RNA.319-201ENST00000365138 92 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNU6-1026P-201ENST00000384465 108 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNU6-541P-201ENST00000384709 110 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 MTCYBP4-201ENST00000401524 249 ntBASIC1.83□□□□□ -2.12
NEDD4P46934 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 272.4 ms