Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RN7SKP88-201ENST00000516847 250 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SLC1A1P43005 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
SLC1A1P43005 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.03□□□□□ -2.24
SLC1A1P43005 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.03□□□□□ -2.24
SLC1A1P43005 AC097065.2-201ENST00000608159 533 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
SLC1A1P43005 7SK.8-201ENST00000612110 250 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 7SK.11-201ENST00000615477 250 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 AC068792.1-201ENST00000621354 417 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 7SK.13-201ENST00000622040 250 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
SLC1A1P43005 RNU6-1123P-201ENST00000362347 106 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 RNU4-20P-201ENST00000365601 151 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 MIR521-1-201ENST00000384902 87 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 MIR487A-201ENST00000385009 80 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SLC1A1P43005 MIR450B-201ENST00000401182 78 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 RNU4-55P-201ENST00000410731 137 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AC016909.1-201ENST00000415916 166 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 SRRM1P2-201ENST00000464531 1192 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 Y_RNA.654-201ENST00000497848 106 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.02□□□□□ -2.25
SLC1A1P43005 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AC024995.1-201ENST00000523014 93 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.02□□□□□ -2.25
SLC1A1P43005 AL929325.1-201ENST00000603096 117 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 MIR8076-201ENST00000611401 83 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AL078596.1-201ENST00000624856 447 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 AC099654.5-201ENST00000636479 350 ntBASIC1.02□□□□□ -2.25
SLC1A1P43005 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SLC1A1P43005 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SLC1A1P43005 SNORA67.2-201ENST00000384300 149 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 MIR320B2-201ENST00000408479 138 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.01□□□□□ -2.25
SLC1A1P43005 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
SLC1A1P43005 RNU1-117P-201ENST00000517041 158 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 MTND1P35-201ENST00000526739 508 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 TPRKBP2-201ENST00000565969 475 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 MIR3664-201ENST00000579074 99 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 AC092807.2-201ENST00000609367 243 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 AC021506.2-201ENST00000612354 169 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 Z69908.1-201ENST00000622603 247 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 AC008873.1-201ENST00000625051 138 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 ZNF204P-201ENST00000416749 2397 ntBASIC1.01□□□□□ -2.25
SLC1A1P43005 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SLC1A1P43005 MIR337-201ENST00000362281 93 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RNU6-214P-201ENST00000384130 107 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RNU6-784P-201ENST00000384330 106 ntBASIC1□□□□□ -2.25
SLC1A1P43005 AC010154.1-201ENST00000425857 269 ntBASIC1□□□□□ -2.25
SLC1A1P43005 MTCO2P16-201ENST00000436962 677 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RPS27P1-201ENST00000450552 247 ntBASIC1□□□□□ -2.25
SLC1A1P43005 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1□□□□□ -2.25
SLC1A1P43005 RNU6-1208P-201ENST00000459588 107 ntBASIC1□□□□□ -2.25
SLC1A1P43005 AC005840.1-201ENST00000498412 377 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
SLC1A1P43005 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
SLC1A1P43005 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SLC1A1P43005 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1□□□□□ -2.25
SLC1A1P43005 CPDP1-201ENST00000579660 283 ntBASIC1□□□□□ -2.25
SLC1A1P43005 AC146944.4-201ENST00000602697 718 ntBASIC1□□□□□ -2.25
SLC1A1P43005 AP001330.5-201ENST00000607176 411 ntBASIC1□□□□□ -2.25
SLC1A1P43005 AC063944.3-201ENST00000609969 533 ntBASIC1□□□□□ -2.25
SLC1A1P43005 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1□□□□□ -2.25
SLC1A1P43005 RNU6-933P-201ENST00000384424 107 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 RNU6-950P-201ENST00000384651 107 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 DYNLT3P2-201ENST00000442517 295 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 PGBD4P5-201ENST00000445958 426 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 MTCO1P29-201ENST00000496868 288 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC091133.4-201ENST00000511142 308 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 RNU6-344P-201ENST00000516635 111 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 RNU6-1332P-201ENST00000516666 104 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC025647.1-201ENST00000517879 253 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.99□□□□□ -2.25
SLC1A1P43005 AC119751.7-201ENST00000600494 245 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC017083.3-201ENST00000609955 700 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.99□□□□□ -2.25
SLC1A1P43005 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC137590.2-201ENST00000619709 240 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 AC068647.2-201ENST00000637380 353 ntBASIC0.99□□□□□ -2.25
SLC1A1P43005 SNORA69-201ENST00000383895 132 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 CDK8P2-201ENST00000415020 547 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 AC008134.1-201ENST00000420943 193 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.98□□□□□ -2.25
SLC1A1P43005 AC083798.1-201ENST00000472671 131 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 RPL23AP75-201ENST00000491601 451 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.98□□□□□ -2.25
SLC1A1P43005 SNORA31.10-201ENST00000516482 106 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 RNU1-142P-201ENST00000516682 145 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 AC104383.1-201ENST00000530297 370 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 AC008088.1-201ENST00000580993 280 ntBASIC0.98□□□□□ -2.25
SLC1A1P43005 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms