Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFSF9P41273 AC016925.1-201ENST00000458303 298 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU7-187P-201ENST00000458985 68 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU7-138P-201ENST00000459479 64 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU6-1208P-201ENST00000459588 107 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 Y_RNA.665-201ENST00000516177 98 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNU6-1041P-201ENST00000516254 102 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 RNA5SP220-201ENST00000516298 104 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 AC069113.1-201ENST00000517763 267 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFSF9P41273 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.18□□□□□ -2.22
TNFSF9P41273 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.18□□□□□ -2.22
TNFSF9P41273 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.18□□□□□ -2.22
TNFSF9P41273 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
TNFSF9P41273 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TNFSF9P41273 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 Y_RNA.3-201ENST00000362331 103 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 RNU6-1322P-201ENST00000364309 107 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 RNU6-1329P-201ENST00000365664 107 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 SNRPEP10-201ENST00000420249 274 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFSF9P41273 USP9YP28-201ENST00000435142 589 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.17□□□□□ -2.22
TNFSF9P41273 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFSF9P41273 RNU7-66P-201ENST00000459469 62 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC007547.1-201ENST00000462177 490 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.17□□□□□ -2.22
TNFSF9P41273 AC008628.2-201ENST00000502605 298 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC091435.1-201ENST00000505442 584 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.17□□□□□ -2.22
TNFSF9P41273 RNU6-612P-201ENST00000516909 102 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.17□□□□□ -2.22
TNFSF9P41273 AC016957.1-201ENST00000534895 309 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
TNFSF9P41273 AC024909.2-201ENST00000553035 286 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC245505.1-201ENST00000556398 224 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC004492.1-201ENST00000607036 742 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 RMST_2.1-201ENST00000617263 136 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 AC024614.3-201ENST00000637860 256 ntBASIC1.17□□□□□ -2.22
TNFSF9P41273 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-1019P-201ENST00000364424 107 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 Y_RNA.256-201ENST00000364594 104 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 Y_RNA.373-201ENST00000365600 103 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 Y_RNA.516-201ENST00000384541 124 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-331P-201ENST00000384724 107 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-1093P-201ENST00000391194 107 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 MRPL35P1-201ENST00000404272 572 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-325P-201ENST00000411132 105 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.16□□□□□ -2.22
TNFSF9P41273 AC012306.1-201ENST00000423267 114 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.16□□□□□ -2.22
TNFSF9P41273 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AC025465.4-201ENST00000513422 638 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-1281P-201ENST00000516223 105 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-314P-201ENST00000516574 104 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFSF9P41273 AL157687.1-201ENST00000554853 619 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AL078604.3-201ENST00000615580 211 ntBASIC1.16□□□□□ -2.22
TNFSF9P41273 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFSF9P41273 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.16□□□□□ -2.22
TNFSF9P41273 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
TNFSF9P41273 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TNFSF9P41273 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TNFSF9P41273 RNU6-545P-201ENST00000362681 104 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 RNU1-76P-201ENST00000362903 159 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 RNU6-254P-201ENST00000363377 107 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 Y_RNA.151-201ENST00000363566 112 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 Y_RNA.231-201ENST00000364358 102 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 MIR548F1-201ENST00000408667 84 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 MTCO3P29-201ENST00000432119 779 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 AL445305.1-201ENST00000432577 575 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFSF9P41273 MTCO2P3-201ENST00000442543 421 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFSF9P41273 MTND1P11-201ENST00000456661 876 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 AF186996.7-201ENST00000492781 209 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 Y_RNA.654-201ENST00000497848 106 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 SNORA19.2-201ENST00000516013 114 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 RNA5SP481-201ENST00000516814 122 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFSF9P41273 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFSF9P41273 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFSF9P41273 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 FAM106DP-201ENST00000586416 501 ntBASIC1.15□□□□□ -2.23
TNFSF9P41273 RPL17P51-201ENST00000605218 238 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms