Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC080013.2-201ENST00000460866 323 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC112771.1-201ENST00000463581 102 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AP000870.1-201ENST00000472927 406 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.96□□□□□ -2.1
SHC1P29353 HMGB3P3-201ENST00000510526 400 ntBASIC1.96□□□□□ -2.1
SHC1P29353 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.96□□□□□ -2.1
SHC1P29353 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC027288.2-201ENST00000553028 243 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.96□□□□□ -2.1
SHC1P29353 AC021231.3-201ENST00000558497 370 ntBASIC1.96□□□□□ -2.1
SHC1P29353 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.96□□□□□ -2.1
SHC1P29353 AC090517.1-201ENST00000569307 266 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC090617.3-201ENST00000573670 475 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.96□□□□□ -2.1
SHC1P29353 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL355297.3-201ENST00000604082 446 ntBASIC1.96□□□□□ -2.1
SHC1P29353 RAC1P9-201ENST00000604990 392 ntBASIC1.96□□□□□ -2.1
SHC1P29353 uc_338.14-201ENST00000613162 166 ntBASIC1.96□□□□□ -2.1
SHC1P29353 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL138825.1-201ENST00000618587 192 ntBASIC1.96□□□□□ -2.1
SHC1P29353 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
SHC1P29353 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SHC1P29353 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHC1P29353 Z75746.1-201ENST00000440243 2080 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-212P-201ENST00000362642 104 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-1301P-201ENST00000362724 104 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-1010P-201ENST00000362757 107 ntBASIC1.95□□□□□ -2.1
SHC1P29353 SNORD114-19-201ENST00000363072 75 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
SHC1P29353 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.95□□□□□ -2.1
SHC1P29353 Y_RNA.458-201ENST00000384240 102 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-196P-201ENST00000384315 107 ntBASIC1.95□□□□□ -2.1
SHC1P29353 SNORA67.3-201ENST00000384366 140 ntBASIC1.95□□□□□ -2.1
SHC1P29353 Y_RNA.551-201ENST00000384661 102 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RPL21P1-201ENST00000399532 476 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.95□□□□□ -2.1
SHC1P29353 MTCO3P19-201ENST00000415864 321 ntBASIC1.95□□□□□ -2.1
SHC1P29353 CYCSP48-201ENST00000417124 323 ntBASIC1.95□□□□□ -2.1
SHC1P29353 EIF1P2-201ENST00000428233 350 ntBASIC1.95□□□□□ -2.1
SHC1P29353 DYNLT3P2-201ENST00000442517 295 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-397P-201ENST00000516226 104 ntBASIC1.95□□□□□ -2.1
SHC1P29353 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
SHC1P29353 RNU6-58P-201ENST00000517143 103 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AL442163.3-201ENST00000554110 156 ntBASIC1.95□□□□□ -2.1
SHC1P29353 UBL5P4-201ENST00000562584 236 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
SHC1P29353 SNORD98-201ENST00000636377 67 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AL109809.4-201ENST00000603520 2185 ntBASIC1.95□□□□□ -2.1
SHC1P29353 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.94□□□□□ -2.1
SHC1P29353 Y_RNA.27-201ENST00000362540 103 ntBASIC1.94□□□□□ -2.1
SHC1P29353 Y_RNA.149-201ENST00000363558 117 ntBASIC1.94□□□□□ -2.1
SHC1P29353 Y_RNA.176-201ENST00000363815 109 ntBASIC1.94□□□□□ -2.1
SHC1P29353 Y_RNA.193-201ENST00000363979 102 ntBASIC1.94□□□□□ -2.1
SHC1P29353 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
SHC1P29353 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
SHC1P29353 RNU6-281P-201ENST00000384212 103 ntBASIC1.94□□□□□ -2.1
SHC1P29353 RNU6-318P-201ENST00000384283 103 ntBASIC1.94□□□□□ -2.1
SHC1P29353 SNORA64-201ENST00000384674 134 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR10B-201ENST00000385011 110 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR153-2-201ENST00000385225 87 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR628-201ENST00000385229 95 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
SHC1P29353 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.94□□□□□ -2.1
SHC1P29353 RPEP5-201ENST00000441137 268 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.94□□□□□ -2.1
SHC1P29353 AC073910.1-201ENST00000445047 438 ntBASIC1.94□□□□□ -2.1
SHC1P29353 FCF1P4-201ENST00000448326 183 ntBASIC1.94□□□□□ -2.1
SHC1P29353 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
SHC1P29353 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.94□□□□□ -2.1
SHC1P29353 AL441985.1-201ENST00000457727 251 ntBASIC1.94□□□□□ -2.1
SHC1P29353 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.94□□□□□ -2.1
SHC1P29353 RPL36AP48-201ENST00000485521 314 ntBASIC1.94□□□□□ -2.1
SHC1P29353 HMGB1P35-201ENST00000503360 598 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AC022868.1-201ENST00000517767 391 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.94□□□□□ -2.1
SHC1P29353 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MIR4765-201ENST00000585007 77 ntBASIC1.94□□□□□ -2.1
SHC1P29353 RPS29P30-201ENST00000600975 111 ntBASIC1.94□□□□□ -2.1
SHC1P29353 PRR13P7-201ENST00000605538 430 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AC096772.1-201ENST00000609146 564 ntBASIC1.94□□□□□ -2.1
SHC1P29353 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
SHC1P29353 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SHC1P29353 AC002543.1-201ENST00000299783 1954 ntBASIC1.94□□□□□ -2.1
SHC1P29353 AL359854.1-201ENST00000614203 1594 ntBASIC1.93□□□□□ -2.1
SHC1P29353 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SHC1P29353 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
SHC1P29353 Y_RNA.64-201ENST00000362845 102 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNU6-486P-201ENST00000363116 107 ntBASIC1.93□□□□□ -2.1
SHC1P29353 Y_RNA.105-201ENST00000363182 111 ntBASIC1.93□□□□□ -2.1
SHC1P29353 Y_RNA.471-201ENST00000384312 102 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNU6-378P-201ENST00000384324 107 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNU6-505P-201ENST00000384427 107 ntBASIC1.93□□□□□ -2.1
SHC1P29353 RNU6-541P-201ENST00000384709 110 ntBASIC1.93□□□□□ -2.1
SHC1P29353 MIR186-201ENST00000384988 86 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms