Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 GMFBP1-201ENST00000467831 427 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 Y_RNA.670-201ENST00000516255 105 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 RNU7-128P-201ENST00000517247 62 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 AC025647.1-201ENST00000517879 253 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 AC090049.2-201ENST00000550377 109 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 MIR4703-201ENST00000577728 79 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 AC068790.2-201ENST00000602601 557 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 MTND4P5-201ENST00000435821 1374 ntBASIC0.4□□□□□ -2.35
HLA-DMBP28068 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
HLA-DMBP28068 Y_RNA.393-201ENST00000383936 102 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 RNU6-57P-201ENST00000411348 103 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.39□□□□□ -2.35
HLA-DMBP28068 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC245047.3-201ENST00000429428 127 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AL035398.1-201ENST00000430869 322 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.39□□□□□ -2.35
HLA-DMBP28068 RNU7-57P-201ENST00000459540 60 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC007215.1-201ENST00000464893 276 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.39□□□□□ -2.35
HLA-DMBP28068 BET1P1-201ENST00000482276 359 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 RNA5SP480-201ENST00000516840 109 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.39□□□□□ -2.35
HLA-DMBP28068 AL162424.1-201ENST00000602325 221 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 PRELID3BP2-201ENST00000605362 201 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC097065.2-201ENST00000608159 533 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 AC008873.1-201ENST00000625051 138 ntBASIC0.39□□□□□ -2.35
HLA-DMBP28068 CASC19-280ENST00000642102 1351 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNU6-199P-201ENST00000362954 107 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNU6-1305P-201ENST00000364353 104 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC008134.1-201ENST00000420943 193 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 UBE2D3P4-201ENST00000441973 436 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 MTCO3P8-201ENST00000453691 755 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 RPS29P15-201ENST00000458329 171 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNU4-54P-201ENST00000516428 129 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNU6-323P-201ENST00000521915 107 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC011712.1-201ENST00000588959 234 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 MIR98-201ENST00000606724 119 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.38□□□□□ -2.35
HLA-DMBP28068 TUSC7.1-201ENST00000610969 165 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 snoZ196.1-201ENST00000625269 89 ntBASIC0.38□□□□□ -2.35
HLA-DMBP28068 RNU6-1240P-201ENST00000365155 104 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 RNU4-48P-201ENST00000365559 182 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
HLA-DMBP28068 MTCO2P8-201ENST00000412213 658 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DMBP28068 MTCO2P34-201ENST00000421994 607 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC005002.2-201ENST00000438228 269 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC004854.1-201ENST00000440356 349 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DMBP28068 SCARNA18-201ENST00000459004 134 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 RNU7-90P-201ENST00000459216 62 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 RNU6-221P-201ENST00000459541 99 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 RPS29P27-201ENST00000463711 170 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC113410.1-201ENST00000505029 247 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC010493.1-201ENST00000513479 292 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 SNORA70.12-201ENST00000516084 153 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 RNA5SP121-201ENST00000516537 101 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.37□□□□□ -2.35
HLA-DMBP28068 MIR3682-201ENST00000581338 84 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AL512605.2-201ENST00000592972 256 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 BNIP3P39-201ENST00000601077 554 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AL357312.1-201ENST00000603879 298 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AP000907.4-201ENST00000604143 237 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AP000240.1-201ENST00000609910 452 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 AC139792.3-201ENST00000623525 224 ntBASIC0.37□□□□□ -2.35
HLA-DMBP28068 SNORD114-26-201ENST00000363543 72 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 U3.8-201ENST00000363675 217 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 RNU5F-7P-201ENST00000363696 115 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 RNU4-12P-201ENST00000365233 139 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 Y_RNA.540-201ENST00000384638 111 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 MIR1-2-201ENST00000384961 85 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 SNORA75.2-201ENST00000391138 150 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 SNORA75.3-201ENST00000391231 150 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 AL451046.2-201ENST00000403074 277 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 RPS3AP3-201ENST00000411933 242 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 SSR1P2-201ENST00000415208 787 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 AC106883.1-201ENST00000418805 562 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 AC009961.2-201ENST00000435771 251 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 FABP5P4-201ENST00000437203 171 ntBASIC0.36□□□□□ -2.35
HLA-DMBP28068 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms