Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SNORA37-201ENST00000384504 129 ntBASIC4.13□□□□□ -1.75
VARSP26640 MIR134-201ENST00000385258 73 ntBASIC4.13□□□□□ -1.75
VARSP26640 AC016717.1-201ENST00000448918 286 ntBASIC4.13□□□□□ -1.75
VARSP26640 MIR449C-201ENST00000516047 92 ntBASIC4.13□□□□□ -1.75
VARSP26640 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.13□□□□□ -1.75
VARSP26640 MIR3129-201ENST00000581095 76 ntBASIC4.13□□□□□ -1.75
VARSP26640 MIR6076-201ENST00000617521 113 ntBASIC4.13□□□□□ -1.75
VARSP26640 AC002064.3-201ENST00000623448 346 ntBASIC4.13□□□□□ -1.75
VARSP26640 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.13□□□□□ -1.75
VARSP26640 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
VARSP26640 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VARSP26640 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARSP26640 AC006504.1-201ENST00000562493 3666 ntBASIC4.13□□□□□ -1.75
VARSP26640 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VARSP26640 RNU6-117P-201ENST00000365415 107 ntBASIC4.12□□□□□ -1.75
VARSP26640 RNU6-573P-201ENST00000383938 106 ntBASIC4.12□□□□□ -1.75
VARSP26640 Y_RNA.544-201ENST00000384650 113 ntBASIC4.12□□□□□ -1.75
VARSP26640 RNA5SP354-201ENST00000391247 136 ntBASIC4.12□□□□□ -1.75
VARSP26640 RNU2-32P-201ENST00000411193 191 ntBASIC4.12□□□□□ -1.75
VARSP26640 AC007064.1-201ENST00000412238 351 ntBASIC4.12□□□□□ -1.75
VARSP26640 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
VARSP26640 AC245102.2-201ENST00000448956 180 ntBASIC4.12□□□□□ -1.75
VARSP26640 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
VARSP26640 RPL36AP48-201ENST00000485521 314 ntBASIC4.12□□□□□ -1.75
VARSP26640 OR9P1P-201ENST00000496431 281 ntBASIC4.12□□□□□ -1.75
VARSP26640 ATP5EP1-201ENST00000510257 156 ntBASIC4.12□□□□□ -1.75
VARSP26640 RNA5SP236-201ENST00000516169 116 ntBASIC4.12□□□□□ -1.75
VARSP26640 AC006064.5-201ENST00000541782 248 ntBASIC4.12□□□□□ -1.75
VARSP26640 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.12□□□□□ -1.75
VARSP26640 AL035470.1-201ENST00000622571 220 ntBASIC4.12□□□□□ -1.75
VARSP26640 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.12□□□□□ -1.75
VARSP26640 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VARSP26640 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VARSP26640 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VARSP26640 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VARSP26640 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VARSP26640 MIR383-201ENST00000362257 73 ntBASIC4.11□□□□□ -1.75
VARSP26640 Y_RNA.49-201ENST00000362714 112 ntBASIC4.11□□□□□ -1.75
VARSP26640 Y_RNA.66-201ENST00000362862 102 ntBASIC4.11□□□□□ -1.75
VARSP26640 RNU6-1138P-201ENST00000365359 106 ntBASIC4.11□□□□□ -1.75
VARSP26640 RNU6-975P-201ENST00000384296 105 ntBASIC4.11□□□□□ -1.75
VARSP26640 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
VARSP26640 RPS3AP1-201ENST00000413190 320 ntBASIC4.11□□□□□ -1.75
VARSP26640 COX6CP6-201ENST00000490840 228 ntBASIC4.11□□□□□ -1.75
VARSP26640 RNA5SP519-201ENST00000516480 119 ntBASIC4.11□□□□□ -1.75
VARSP26640 RNU6-126P-201ENST00000516685 103 ntBASIC4.11□□□□□ -1.75
VARSP26640 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
VARSP26640 GNRHR2P1-201ENST00000555315 631 ntBASIC4.11□□□□□ -1.75
VARSP26640 MIR4662B-201ENST00000579498 81 ntBASIC4.11□□□□□ -1.75
VARSP26640 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
VARSP26640 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VARSP26640 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VARSP26640 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
VARSP26640 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VARSP26640 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VARSP26640 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VARSP26640 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.11□□□□□ -1.75
VARSP26640 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
VARSP26640 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VARSP26640 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 SNORA1-201ENST00000384107 130 ntBASIC4.1□□□□□ -1.75
VARSP26640 RNY1P7-201ENST00000384743 110 ntBASIC4.1□□□□□ -1.75
VARSP26640 MIR562-201ENST00000384894 95 ntBASIC4.1□□□□□ -1.75
VARSP26640 RHEBP3-201ENST00000411920 351 ntBASIC4.1□□□□□ -1.75
VARSP26640 SNORA84-201ENST00000459229 133 ntBASIC4.1□□□□□ -1.75
VARSP26640 RN7SL691P-201ENST00000494487 301 ntBASIC4.1□□□□□ -1.75
VARSP26640 AC034105.4-201ENST00000568304 277 ntBASIC4.1□□□□□ -1.75
VARSP26640 MIR4286-201ENST00000580651 93 ntBASIC4.1□□□□□ -1.75
VARSP26640 AC096577.2-201ENST00000611455 153 ntBASIC4.1□□□□□ -1.75
VARSP26640 AL442128.1-201ENST00000615151 90 ntBASIC4.1□□□□□ -1.75
VARSP26640 AL137067.1-201ENST00000615933 120 ntBASIC4.1□□□□□ -1.75
VARSP26640 MIR8059-201ENST00000620427 81 ntBASIC4.1□□□□□ -1.75
VARSP26640 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
VARSP26640 AL589743.1-201ENST00000551932 2712 ntBASIC4.1□□□□□ -1.75
VARSP26640 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARSP26640 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
VARSP26640 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.09□□□□□ -1.75
VARSP26640 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VARSP26640 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.75
VARSP26640 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.09□□□□□ -1.75
VARSP26640 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.09□□□□□ -1.75
VARSP26640 RNU1-14P-201ENST00000362759 152 ntBASIC4.09□□□□□ -1.75
VARSP26640 RNU1-132P-201ENST00000364300 164 ntBASIC4.09□□□□□ -1.75
VARSP26640 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
VARSP26640 RNU6-750P-201ENST00000390946 107 ntBASIC4.09□□□□□ -1.75
VARSP26640 RPS4XP11-201ENST00000446897 772 ntBASIC4.09□□□□□ -1.75
VARSP26640 RN7SL807P-201ENST00000470923 297 ntBASIC4.09□□□□□ -1.75
VARSP26640 RPS27P22-201ENST00000478056 241 ntBASIC4.09□□□□□ -1.75
VARSP26640 AC096725.1-201ENST00000514266 313 ntBASIC4.09□□□□□ -1.75
VARSP26640 RNA5SP49-201ENST00000516450 115 ntBASIC4.09□□□□□ -1.75
VARSP26640 RNU6-94P-201ENST00000607728 107 ntBASIC4.09□□□□□ -1.75
VARSP26640 RNA5SP196-201ENST00000625967 102 ntBASIC4.09□□□□□ -1.75
VARSP26640 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VARSP26640 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms