Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
USF1P22415 AL442163.3-201ENST00000554110 156 ntBASIC0.99□□□□□ -2.25
USF1P22415 AL157687.1-201ENST00000554853 619 ntBASIC0.99□□□□□ -2.25
USF1P22415 MIR5692C1-201ENST00000585309 91 ntBASIC0.99□□□□□ -2.25
USF1P22415 Z99497.2-201ENST00000603634 310 ntBASIC0.99□□□□□ -2.25
USF1P22415 AL365434.2-201ENST00000607979 234 ntBASIC0.99□□□□□ -2.25
USF1P22415 RMST_3.1-201ENST00000611651 109 ntBASIC0.99□□□□□ -2.25
USF1P22415 AC040896.1-201ENST00000613819 479 ntBASIC0.99□□□□□ -2.25
USF1P22415 RMST_2.1-201ENST00000617263 136 ntBASIC0.99□□□□□ -2.25
USF1P22415 AC137590.2-201ENST00000619709 240 ntBASIC0.99□□□□□ -2.25
USF1P22415 MIR8065-201ENST00000620577 100 ntBASIC0.99□□□□□ -2.25
USF1P22415 AC009033.1-201ENST00000624279 431 ntBASIC0.99□□□□□ -2.25
USF1P22415 OR5AK4P-201ENST00000635912 903 ntBASIC0.99□□□□□ -2.25
USF1P22415 RNU6-1123P-201ENST00000362347 106 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNA5SP327-201ENST00000362494 101 ntBASIC0.98□□□□□ -2.25
USF1P22415 SNORA33-201ENST00000363664 130 ntBASIC0.98□□□□□ -2.25
USF1P22415 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU6-1305P-201ENST00000364353 104 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU4-66P-201ENST00000365199 138 ntBASIC0.98□□□□□ -2.25
USF1P22415 Y_RNA.381-201ENST00000365666 102 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU6-38P-201ENST00000384085 107 ntBASIC0.98□□□□□ -2.25
USF1P22415 Y_RNA.466-201ENST00000384294 113 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU6-950P-201ENST00000384651 107 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU6-417P-201ENST00000384712 107 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNY3P9-201ENST00000384727 106 ntBASIC0.98□□□□□ -2.25
USF1P22415 MIR1253-201ENST00000408273 105 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC004866.1-201ENST00000411748 78 ntBASIC0.98□□□□□ -2.25
USF1P22415 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.98□□□□□ -2.25
USF1P22415 RNU7-34P-201ENST00000459394 64 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU7-57P-201ENST00000459540 60 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC091885.1-201ENST00000506658 268 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNA5SP401-201ENST00000515920 127 ntBASIC0.98□□□□□ -2.25
USF1P22415 RNU6-1038P-201ENST00000516516 104 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC090821.2-201ENST00000523552 176 ntBASIC0.98□□□□□ -2.25
USF1P22415 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.98□□□□□ -2.25
USF1P22415 AL050343.2-201ENST00000607338 280 ntBASIC0.98□□□□□ -2.25
USF1P22415 MIR8076-201ENST00000611401 83 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC009509.4-201ENST00000619202 509 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC006001.4-201ENST00000622243 395 ntBASIC0.98□□□□□ -2.25
USF1P22415 AC139792.3-201ENST00000623525 224 ntBASIC0.98□□□□□ -2.25
USF1P22415 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
USF1P22415 Y_RNA.287-201ENST00000364853 94 ntBASIC0.97□□□□□ -2.25
USF1P22415 Y_RNA.378-201ENST00000365652 113 ntBASIC0.97□□□□□ -2.25
USF1P22415 RNU6-214P-201ENST00000384130 107 ntBASIC0.97□□□□□ -2.25
USF1P22415 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
USF1P22415 RNU6-57P-201ENST00000411348 103 ntBASIC0.97□□□□□ -2.25
USF1P22415 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
USF1P22415 RPS4XP11-201ENST00000446897 772 ntBASIC0.97□□□□□ -2.25
USF1P22415 Y_RNA.654-201ENST00000497848 106 ntBASIC0.97□□□□□ -2.25
USF1P22415 SNORA19.2-201ENST00000516013 114 ntBASIC0.97□□□□□ -2.25
USF1P22415 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.97□□□□□ -2.25
USF1P22415 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.97□□□□□ -2.25
USF1P22415 AL118558.2-201ENST00000556294 238 ntBASIC0.97□□□□□ -2.25
USF1P22415 CPDP1-201ENST00000579660 283 ntBASIC0.97□□□□□ -2.25
USF1P22415 MIR4742-201ENST00000581069 85 ntBASIC0.97□□□□□ -2.25
USF1P22415 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
USF1P22415 MZT1P2-201ENST00000604387 248 ntBASIC0.97□□□□□ -2.25
USF1P22415 AC017083.3-201ENST00000609955 700 ntBASIC0.97□□□□□ -2.25
USF1P22415 AC063944.3-201ENST00000609969 533 ntBASIC0.97□□□□□ -2.25
USF1P22415 AL121757.2-201ENST00000611223 313 ntBASIC0.97□□□□□ -2.25
USF1P22415 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.97□□□□□ -2.25
USF1P22415 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.97□□□□□ -2.25
USF1P22415 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.97□□□□□ -2.25
USF1P22415 RNA5SP259-201ENST00000365541 109 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNU6-1080P-201ENST00000383982 107 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNU6-784P-201ENST00000384330 106 ntBASIC0.96□□□□□ -2.26
USF1P22415 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNA5SP323-201ENST00000391094 133 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNU4-55P-201ENST00000410731 137 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNU6-325P-201ENST00000411132 105 ntBASIC0.96□□□□□ -2.26
USF1P22415 AL663109.1-201ENST00000411498 844 ntBASIC0.96□□□□□ -2.26
USF1P22415 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.96□□□□□ -2.26
USF1P22415 TIMM9P3-201ENST00000428659 274 ntBASIC0.96□□□□□ -2.26
USF1P22415 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.96□□□□□ -2.26
USF1P22415 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.96□□□□□ -2.26
USF1P22415 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.96□□□□□ -2.26
USF1P22415 RNU6-261P-201ENST00000459506 102 ntBASIC0.96□□□□□ -2.26
USF1P22415 AF186996.7-201ENST00000492781 209 ntBASIC0.96□□□□□ -2.26
USF1P22415 AC092436.3-201ENST00000511788 257 ntBASIC0.96□□□□□ -2.26
USF1P22415 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
USF1P22415 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.96□□□□□ -2.26
USF1P22415 AC008088.1-201ENST00000580993 280 ntBASIC0.96□□□□□ -2.26
USF1P22415 AC100830.2-201ENST00000581636 240 ntBASIC0.96□□□□□ -2.26
USF1P22415 AP001330.5-201ENST00000607176 411 ntBASIC0.96□□□□□ -2.26
USF1P22415 AC068792.1-201ENST00000621354 417 ntBASIC0.96□□□□□ -2.26
USF1P22415 AL078596.1-201ENST00000624856 447 ntBASIC0.96□□□□□ -2.26
USF1P22415 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.96□□□□□ -2.26
USF1P22415 SCARNA4-201ENST00000629045 128 ntBASIC0.96□□□□□ -2.26
USF1P22415 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
USF1P22415 RNY1-201ENST00000364228 113 ntBASIC0.95□□□□□ -2.26
USF1P22415 SNORA67.2-201ENST00000384300 149 ntBASIC0.95□□□□□ -2.26
USF1P22415 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
USF1P22415 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
USF1P22415 RNA5SP467-201ENST00000391274 118 ntBASIC0.95□□□□□ -2.26
USF1P22415 AC008134.1-201ENST00000420943 193 ntBASIC0.95□□□□□ -2.26
USF1P22415 MRPS10P2-201ENST00000431226 381 ntBASIC0.95□□□□□ -2.26
USF1P22415 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.95□□□□□ -2.26
USF1P22415 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
USF1P22415 AC083798.1-201ENST00000472671 131 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms