Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC010733.2-201ENST00000589496 5702 ntBASIC4.99□□□□□ -1.61
CD44P16070 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD44P16070 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD44P16070 SNORA1B-201ENST00000362535 133 ntBASIC4.99□□□□□ -1.61
CD44P16070 RNU6-161P-201ENST00000363051 106 ntBASIC4.99□□□□□ -1.61
CD44P16070 snoU2-30.1-201ENST00000365012 70 ntBASIC4.99□□□□□ -1.61
CD44P16070 RNA5SP146-201ENST00000410743 123 ntBASIC4.99□□□□□ -1.61
CD44P16070 RNU7-45P-201ENST00000459460 63 ntBASIC4.99□□□□□ -1.61
CD44P16070 Y_RNA.660-201ENST00000516002 120 ntBASIC4.99□□□□□ -1.61
CD44P16070 RNU7-128P-201ENST00000517247 62 ntBASIC4.99□□□□□ -1.61
CD44P16070 RN7SL52P-201ENST00000584271 284 ntBASIC4.99□□□□□ -1.61
CD44P16070 RNU6-90P-201ENST00000606352 106 ntBASIC4.99□□□□□ -1.61
CD44P16070 U2.20-201ENST00000613956 192 ntBASIC4.99□□□□□ -1.61
CD44P16070 MIR6891-201ENST00000618788 93 ntBASIC4.99□□□□□ -1.61
CD44P16070 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.99□□□□□ -1.61
CD44P16070 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD44P16070 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD44P16070 AC092435.4-201ENST00000623012 4159 ntBASIC4.99□□□□□ -1.61
CD44P16070 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD44P16070 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD44P16070 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.99□□□□□ -1.61
CD44P16070 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.98□□□□□ -1.61
CD44P16070 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.98□□□□□ -1.61
CD44P16070 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 AL161912.2-201ENST00000565707 3007 ntBASIC4.98□□□□□ -1.61
CD44P16070 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
CD44P16070 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 RNU6-1084P-201ENST00000362498 107 ntBASIC4.98□□□□□ -1.61
CD44P16070 Y_RNA.168-201ENST00000363740 102 ntBASIC4.98□□□□□ -1.61
CD44P16070 SNORA32-201ENST00000384072 121 ntBASIC4.98□□□□□ -1.61
CD44P16070 RNU1-44P-201ENST00000384453 163 ntBASIC4.98□□□□□ -1.61
CD44P16070 RN7SL41P-201ENST00000476144 297 ntBASIC4.98□□□□□ -1.61
CD44P16070 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.98□□□□□ -1.61
CD44P16070 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.98□□□□□ -1.61
CD44P16070 MIR4762-201ENST00000585261 75 ntBASIC4.98□□□□□ -1.61
CD44P16070 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.98□□□□□ -1.61
CD44P16070 AC005520.4-201ENST00000604337 90 ntBASIC4.98□□□□□ -1.61
CD44P16070 AC090517.3-201ENST00000625170 141 ntBASIC4.98□□□□□ -1.61
CD44P16070 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.98□□□□□ -1.61
CD44P16070 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD44P16070 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
CD44P16070 OR51H2P-202ENST00000641424 3046 ntBASIC4.97□□□□□ -1.61
CD44P16070 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD44P16070 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.97□□□□□ -1.61
CD44P16070 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CD44P16070 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.97□□□□□ -1.61
CD44P16070 SNORA22.1-201ENST00000362701 134 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
CD44P16070 Y_RNA.241-201ENST00000364470 117 ntBASIC4.97□□□□□ -1.61
CD44P16070 MIR181B2-201ENST00000385004 89 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-1319P-201ENST00000390855 104 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-747P-201ENST00000390928 104 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-1307P-201ENST00000391012 103 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-241P-201ENST00000391148 104 ntBASIC4.97□□□□□ -1.61
CD44P16070 RPL23AP48-201ENST00000406913 488 ntBASIC4.97□□□□□ -1.61
CD44P16070 RNU6-177P-201ENST00000411257 104 ntBASIC4.97□□□□□ -1.61
CD44P16070 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.97□□□□□ -1.61
CD44P16070 IFNWP4-201ENST00000453148 294 ntBASIC4.97□□□□□ -1.61
CD44P16070 AL049830.1-201ENST00000468034 425 ntBASIC4.97□□□□□ -1.61
CD44P16070 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.97□□□□□ -1.61
CD44P16070 AC007536.1-201ENST00000533382 349 ntBASIC4.97□□□□□ -1.61
CD44P16070 AC044860.2-201ENST00000561005 179 ntBASIC4.97□□□□□ -1.61
CD44P16070 AC091042.1-201ENST00000579213 173 ntBASIC4.97□□□□□ -1.61
CD44P16070 RN7SL176P-201ENST00000580352 264 ntBASIC4.97□□□□□ -1.61
CD44P16070 MIR7154-201ENST00000620673 73 ntBASIC4.97□□□□□ -1.61
CD44P16070 MIR6715B-201ENST00000637172 77 ntBASIC4.97□□□□□ -1.61
CD44P16070 MIR1297-201ENST00000637311 77 ntBASIC4.97□□□□□ -1.61
CD44P16070 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CD44P16070 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
CD44P16070 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD44P16070 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.96□□□□□ -1.61
CD44P16070 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CD44P16070 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD44P16070 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD44P16070 SNORD68-201ENST00000363214 84 ntBASIC4.96□□□□□ -1.62
CD44P16070 Y_RNA.336-201ENST00000365307 109 ntBASIC4.96□□□□□ -1.62
CD44P16070 RNA5SP22-201ENST00000365393 109 ntBASIC4.96□□□□□ -1.62
CD44P16070 Y_RNA.596-201ENST00000410462 109 ntBASIC4.96□□□□□ -1.62
CD44P16070 U3.44-201ENST00000458938 192 ntBASIC4.96□□□□□ -1.62
CD44P16070 RPPH1-2P-201ENST00000516688 293 ntBASIC4.96□□□□□ -1.62
CD44P16070 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.96□□□□□ -1.62
CD44P16070 MIR3934-201ENST00000579806 107 ntBASIC4.96□□□□□ -1.62
CD44P16070 MIR4436B2-201ENST00000581415 91 ntBASIC4.96□□□□□ -1.62
CD44P16070 MIR4436B1-201ENST00000583272 91 ntBASIC4.96□□□□□ -1.62
CD44P16070 MIR6841-201ENST00000637129 72 ntBASIC4.96□□□□□ -1.62
CD44P16070 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CD44P16070 SDAD1P1-202ENST00000524156 2051 ntBASIC4.96□□□□□ -1.62
CD44P16070 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.96□□□□□ -1.62
CD44P16070 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD44P16070 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CD44P16070 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.96□□□□□ -1.62
CD44P16070 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.95□□□□□ -1.62
CD44P16070 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CD44P16070 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD44P16070 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms