Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORD114-17-201ENST00000364699 75 ntBASIC-1.48□□□□□ -2.65
VCANP13611 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.48□□□□□ -2.65
VCANP13611 RNU6-721P-201ENST00000410155 105 ntBASIC-1.48□□□□□ -2.65
VCANP13611 SNORD38.3-201ENST00000516599 73 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC013828.2-201ENST00000532487 235 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.48□□□□□ -2.65
VCANP13611 MIR4756-201ENST00000577874 78 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC019131.2-201ENST00000609071 870 ntBASIC-1.48□□□□□ -2.65
VCANP13611 HSPE1P23-201ENST00000509838 286 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC027338.1-201ENST00000514840 825 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.48□□□□□ -2.65
VCANP13611 AL391903.3-201ENST00000612158 163 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AC068533.2-201ENST00000411872 306 ntBASIC-1.48□□□□□ -2.65
VCANP13611 MTCO3P27-201ENST00000514397 196 ntBASIC-1.48□□□□□ -2.65
VCANP13611 AP002802.2-201ENST00000605877 235 ntBASIC-1.48□□□□□ -2.65
VCANP13611 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.48□□□□□ -2.65
VCANP13611 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.48□□□□□ -2.65
VCANP13611 SNORA2.1-201ENST00000363089 137 ntBASIC-1.49□□□□□ -2.65
VCANP13611 AL606923.1-201ENST00000406616 190 ntBASIC-1.49□□□□□ -2.65
VCANP13611 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.49□□□□□ -2.65
VCANP13611 RNU7-134P-201ENST00000458997 64 ntBASIC-1.49□□□□□ -2.65
VCANP13611 SNORA70.16-201ENST00000516390 95 ntBASIC-1.49□□□□□ -2.65
VCANP13611 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.49□□□□□ -2.65
VCANP13611 RNU6-964P-201ENST00000516524 69 ntBASIC-1.49□□□□□ -2.65
VCANP13611 SNORA25.16-201ENST00000516741 121 ntBASIC-1.49□□□□□ -2.65
VCANP13611 SNORA18.7-201ENST00000516910 131 ntBASIC-1.49□□□□□ -2.65
VCANP13611 AC139769.3-201ENST00000618383 175 ntBASIC-1.49□□□□□ -2.65
VCANP13611 AC017104.5-201ENST00000637647 639 ntBASIC-1.49□□□□□ -2.65
VCANP13611 RNU2-48P-201ENST00000410694 191 ntBASIC-1.49□□□□□ -2.65
VCANP13611 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.49□□□□□ -2.65
VCANP13611 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.49□□□□□ -2.65
VCANP13611 AC023827.1-201ENST00000569247 97 ntBASIC-1.49□□□□□ -2.65
VCANP13611 MIR3152-201ENST00000579801 74 ntBASIC-1.49□□□□□ -2.65
VCANP13611 MIR4280-201ENST00000582178 76 ntBASIC-1.49□□□□□ -2.65
VCANP13611 MIR520A-201ENST00000384862 85 ntBASIC-1.5□□□□□ -2.65
VCANP13611 USMG5P1-201ENST00000425964 177 ntBASIC-1.5□□□□□ -2.65
VCANP13611 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.5□□□□□ -2.65
VCANP13611 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-1.5□□□□□ -2.65
VCANP13611 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.5□□□□□ -2.65
VCANP13611 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.5□□□□□ -2.65
VCANP13611 AC060788.1-201ENST00000521318 469 ntBASIC-1.5□□□□□ -2.65
VCANP13611 MIR1185-1-201ENST00000408598 86 ntBASIC-1.5□□□□□ -2.65
VCANP13611 AL049734.2-201ENST00000441066 616 ntBASIC-1.5□□□□□ -2.65
VCANP13611 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.5□□□□□ -2.65
VCANP13611 MIR1273C-201ENST00000578669 77 ntBASIC-1.5□□□□□ -2.65
VCANP13611 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.5□□□□□ -2.65
VCANP13611 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.51□□□□□ -2.65
VCANP13611 MIR147A-201ENST00000385079 72 ntBASIC-1.51□□□□□ -2.65
VCANP13611 AL606845.1-201ENST00000404881 255 ntBASIC-1.51□□□□□ -2.65
VCANP13611 RBM11P1-201ENST00000604951 799 ntBASIC-1.51□□□□□ -2.65
VCANP13611 BCRP9-201ENST00000605312 388 ntBASIC-1.51□□□□□ -2.65
VCANP13611 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-1.51□□□□□ -2.65
VCANP13611 SNORD115-44-201ENST00000365391 82 ntBASIC-1.51□□□□□ -2.65
VCANP13611 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.51□□□□□ -2.65
VCANP13611 TAF13P2-201ENST00000416876 286 ntBASIC-1.51□□□□□ -2.65
VCANP13611 MIR466-201ENST00000580653 84 ntBASIC-1.51□□□□□ -2.65
VCANP13611 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
VCANP13611 RNA5SP493-201ENST00000364115 91 ntBASIC-1.51□□□□□ -2.65
VCANP13611 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.51□□□□□ -2.65
VCANP13611 AL357139.1-201ENST00000407792 426 ntBASIC-1.51□□□□□ -2.65
VCANP13611 RNU6-293P-201ENST00000411259 106 ntBASIC-1.51□□□□□ -2.65
VCANP13611 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.51□□□□□ -2.65
VCANP13611 AC009237.7-201ENST00000447357 229 ntBASIC-1.51□□□□□ -2.65
VCANP13611 UBE2Q2P9-201ENST00000490086 202 ntBASIC-1.51□□□□□ -2.65
VCANP13611 SNORD22.1-201ENST00000516331 125 ntBASIC-1.51□□□□□ -2.65
VCANP13611 MTND2P26-201ENST00000528255 1029 ntBASIC-1.51□□□□□ -2.65
VCANP13611 MIR3129-201ENST00000581095 76 ntBASIC-1.51□□□□□ -2.65
VCANP13611 AL354950.2-201ENST00000617939 290 ntBASIC-1.51□□□□□ -2.65
VCANP13611 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.52□□□□□ -2.65
VCANP13611 SNORD111-201ENST00000408139 94 ntBASIC-1.52□□□□□ -2.65
VCANP13611 AC007490.1-201ENST00000624321 703 ntBASIC-1.52□□□□□ -2.65
VCANP13611 AC010332.2-201ENST00000613083 1904 ntBASIC-1.52□□□□□ -2.65
VCANP13611 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.52□□□□□ -2.65
VCANP13611 RNU6-187P-201ENST00000384139 106 ntBASIC-1.52□□□□□ -2.65
VCANP13611 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.52□□□□□ -2.65
VCANP13611 AL158053.1-201ENST00000441503 453 ntBASIC-1.52□□□□□ -2.65
VCANP13611 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.52□□□□□ -2.65
VCANP13611 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-1.52□□□□□ -2.65
VCANP13611 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.52□□□□□ -2.65
VCANP13611 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.52□□□□□ -2.65
VCANP13611 RNU6-86P-201ENST00000606534 107 ntBASIC-1.52□□□□□ -2.65
VCANP13611 SNORA63C-201ENST00000364578 129 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNU6-169P-201ENST00000365336 107 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNA5SP323-201ENST00000391094 133 ntBASIC-1.53□□□□□ -2.65
VCANP13611 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.53□□□□□ -2.65
VCANP13611 AC064872.1-201ENST00000604823 1072 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNU6-87P-201ENST00000607561 108 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.53□□□□□ -2.65
VCANP13611 RNU6-750P-201ENST00000390946 107 ntBASIC-1.53□□□□□ -2.65
VCANP13611 USP9YP22-201ENST00000438971 294 ntBASIC-1.53□□□□□ -2.65
VCANP13611 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-1.53□□□□□ -2.65
VCANP13611 RPL39P34-201ENST00000477141 156 ntBASIC-1.53□□□□□ -2.65
VCANP13611 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.53□□□□□ -2.65
VCANP13611 AC024589.1-201ENST00000512207 263 ntBASIC-1.53□□□□□ -2.65
VCANP13611 AC105036.1-201ENST00000566222 271 ntBASIC-1.53□□□□□ -2.65
VCANP13611 AC087683.2-201ENST00000611384 326 ntBASIC-1.53□□□□□ -2.65
VCANP13611 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.53□□□□□ -2.65
VCANP13611 MIR501-201ENST00000390204 84 ntBASIC-1.53□□□□□ -2.65
VCANP13611 AC027644.1-201ENST00000419595 298 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms