Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC146507.2-201ENST00000460608 476 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RN7SL863P-201ENST00000462370 296 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 CYCTP-201ENST00000504253 315 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RN7SKP83-201ENST00000516512 178 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RNA5SP170-201ENST00000517150 101 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 RNU2-12P-201ENST00000517216 168 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 AC109810.1-201ENST00000534066 224 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 AC011603.4-201ENST00000611325 277 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 MIR7106-201ENST00000612419 65 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 AL078604.3-201ENST00000615580 211 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 TUG1_4.1-201ENST00000619464 181 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 MIR4727-201ENST00000622232 55 ntBASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CSB-PGBD3P0DP91 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1255P-201ENST00000363434 112 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1210P-201ENST00000363775 107 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1310P-201ENST00000384153 107 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU1-57P-201ENST00000384491 166 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 Y_RNA.563-201ENST00000384707 108 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 MIR626-201ENST00000385032 94 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-460P-201ENST00000391158 108 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC006989.1-201ENST00000427212 131 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 RNU7-107P-201ENST00000459121 61 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC026333.2-201ENST00000542164 106 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AL356575.1-201ENST00000603008 283 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 MIR6129-201ENST00000616087 109 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC013791.1-201ENST00000616619 62 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 AC134026.1-201ENST00000623249 2239 ntBASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSB-PGBD3P0DP91 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-655P-201ENST00000362858 107 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-324P-201ENST00000363957 106 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-1048P-201ENST00000364054 107 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-454P-201ENST00000364292 107 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 Y_RNA.337-201ENST00000365312 102 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 SNORA44-201ENST00000384584 132 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 RNU6-376P-201ENST00000384731 106 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 AC009414.1-201ENST00000427200 443 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 AC092991.1-201ENST00000477176 376 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 AC079598.5-201ENST00000547460 117 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 FAM35DP-201ENST00000323387 2712 ntBASIC4.41□□□□□ -1.7
CSB-PGBD3P0DP91 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CSB-PGBD3P0DP91 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 RNU1-18P-201ENST00000363062 164 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 RNY1P11-201ENST00000363759 113 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 SNORA5B-201ENST00000363786 132 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 AC006461.1-201ENST00000412637 326 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 Z98742.2-201ENST00000431564 187 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 EEF1B2P7-201ENST00000451177 676 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 AC136628.3-201ENST00000521868 290 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 AL033523.1-201ENST00000605153 153 ntBASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CSB-PGBD3P0DP91 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.24-201ENST00000362508 103 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.293-201ENST00000364908 93 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-245P-201ENST00000384020 107 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 MIR591-201ENST00000385290 95 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 MIR320B2-201ENST00000408479 138 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RNA5SP475-201ENST00000410568 110 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-1064P-201ENST00000410626 104 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RPL23AP70-201ENST00000483361 460 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-1007P-201ENST00000516586 107 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC127455.1-201ENST00000565496 145 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC020914.4-201ENST00000597690 277 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 Y_RNA.802-201ENST00000614892 130 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC110079.1-202ENST00000635213 138 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AC068647.1-201ENST00000489539 2265 ntBASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSB-PGBD3P0DP91 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 AC010329.5-201ENST00000623497 2174 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 RNU4-15P-201ENST00000362613 141 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 RNU6-407P-201ENST00000365280 104 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 SNORA8.3-201ENST00000384679 139 ntBASIC4.38□□□□□ -1.71
CSB-PGBD3P0DP91 SNORD37.2-201ENST00000391075 66 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms