Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-1335P-201ENST00000365426 107 ntBASIC0.46□□□□□ -2.34
TPM1P09493 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.46□□□□□ -2.34
TPM1P09493 RPS3AP3-201ENST00000411933 242 ntBASIC0.46□□□□□ -2.34
TPM1P09493 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.46□□□□□ -2.34
TPM1P09493 AC245047.8-201ENST00000456455 284 ntBASIC0.46□□□□□ -2.34
TPM1P09493 ELOCP32-201ENST00000548625 324 ntBASIC0.46□□□□□ -2.34
TPM1P09493 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.46□□□□□ -2.34
TPM1P09493 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.46□□□□□ -2.34
TPM1P09493 SNORA28-201ENST00000606769 126 ntBASIC0.46□□□□□ -2.34
TPM1P09493 AC006566.1-201ENST00000608943 513 ntBASIC0.46□□□□□ -2.34
TPM1P09493 AL360219.1-201ENST00000610230 366 ntBASIC0.46□□□□□ -2.34
TPM1P09493 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TPM1P09493 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.45□□□□□ -2.34
TPM1P09493 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.45□□□□□ -2.34
TPM1P09493 RNU7-167P-201ENST00000459160 62 ntBASIC0.45□□□□□ -2.34
TPM1P09493 RPS29P27-201ENST00000463711 170 ntBASIC0.45□□□□□ -2.34
TPM1P09493 RPL39P5-202ENST00000512505 151 ntBASIC0.45□□□□□ -2.34
TPM1P09493 RNU7-99P-201ENST00000516271 62 ntBASIC0.45□□□□□ -2.34
TPM1P09493 AL137100.2-201ENST00000555786 315 ntBASIC0.45□□□□□ -2.34
TPM1P09493 AC025627.3-201ENST00000582078 182 ntBASIC0.45□□□□□ -2.34
TPM1P09493 MIR4769-201ENST00000584126 77 ntBASIC0.45□□□□□ -2.34
TPM1P09493 U6.73-201ENST00000619194 103 ntBASIC0.45□□□□□ -2.34
TPM1P09493 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
TPM1P09493 RNU6-1286P-201ENST00000383871 107 ntBASIC0.44□□□□□ -2.34
TPM1P09493 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TPM1P09493 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.44□□□□□ -2.34
TPM1P09493 AC092423.1-201ENST00000430165 186 ntBASIC0.44□□□□□ -2.34
TPM1P09493 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.44□□□□□ -2.34
TPM1P09493 AL445305.1-201ENST00000432577 575 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.44□□□□□ -2.34
TPM1P09493 STAG3L5P-204ENST00000443759 179 ntBASIC0.44□□□□□ -2.34
TPM1P09493 MTCO2P7-201ENST00000446518 666 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC233266.1-201ENST00000454518 96 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC022493.2-201ENST00000506122 481 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.44□□□□□ -2.34
TPM1P09493 MTND2P32-201ENST00000521584 1038 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.44□□□□□ -2.34
TPM1P09493 SUB1P2-201ENST00000556401 297 ntBASIC0.44□□□□□ -2.34
TPM1P09493 MTND1P15-201ENST00000579262 949 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC242852.1-201ENST00000612151 96 ntBASIC0.44□□□□□ -2.34
TPM1P09493 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC244015.1-201ENST00000622301 99 ntBASIC0.44□□□□□ -2.34
TPM1P09493 AC139792.3-201ENST00000623525 224 ntBASIC0.44□□□□□ -2.34
TPM1P09493 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TPM1P09493 MIR620-201ENST00000385232 95 ntBASIC0.43□□□□□ -2.34
TPM1P09493 MIR320B2-201ENST00000408479 138 ntBASIC0.43□□□□□ -2.34
TPM1P09493 SNORD99-201ENST00000408612 74 ntBASIC0.43□□□□□ -2.34
TPM1P09493 SSR1P2-201ENST00000415208 787 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
TPM1P09493 SNRPFP3-201ENST00000457792 225 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.43□□□□□ -2.34
TPM1P09493 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.43□□□□□ -2.34
TPM1P09493 AC105417.1-201ENST00000514691 285 ntBASIC0.43□□□□□ -2.34
TPM1P09493 RNU6-344P-201ENST00000516635 111 ntBASIC0.43□□□□□ -2.34
TPM1P09493 FAM106DP-201ENST00000586416 501 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AC242498.1-201ENST00000604134 111 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AC004832.4-201ENST00000608952 331 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AL391903.3-201ENST00000612158 163 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AC243994.1-201ENST00000618627 109 ntBASIC0.43□□□□□ -2.34
TPM1P09493 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.42□□□□□ -2.34
TPM1P09493 RNU6-424P-201ENST00000384367 105 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AC106883.1-201ENST00000418805 562 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.42□□□□□ -2.34
TPM1P09493 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.42□□□□□ -2.34
TPM1P09493 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.42□□□□□ -2.34
TPM1P09493 LINC01399-202ENST00000458450 244 ntBASIC0.42□□□□□ -2.34
TPM1P09493 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
TPM1P09493 RNU6-1037P-201ENST00000459571 107 ntBASIC0.42□□□□□ -2.34
TPM1P09493 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AC027419.1-201ENST00000522976 328 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AP003461.1-201ENST00000528866 78 ntBASIC0.42□□□□□ -2.34
TPM1P09493 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
TPM1P09493 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AL022161.1-201ENST00000604390 213 ntBASIC0.42□□□□□ -2.34
TPM1P09493 Z84480.1-201ENST00000605131 311 ntBASIC0.42□□□□□ -2.34
TPM1P09493 AC010608.3-201ENST00000625048 527 ntBASIC0.42□□□□□ -2.34
TPM1P09493 SCARNA4-201ENST00000629045 128 ntBASIC0.42□□□□□ -2.34
TPM1P09493 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
TPM1P09493 RNU6-163P-201ENST00000384396 106 ntBASIC0.41□□□□□ -2.34
TPM1P09493 RNU6-195P-201ENST00000411352 109 ntBASIC0.41□□□□□ -2.34
TPM1P09493 ISCA1P6-201ENST00000427740 390 ntBASIC0.41□□□□□ -2.34
TPM1P09493 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.41□□□□□ -2.34
TPM1P09493 AC009961.2-201ENST00000435771 251 ntBASIC0.41□□□□□ -2.34
TPM1P09493 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.41□□□□□ -2.34
TPM1P09493 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.41□□□□□ -2.34
TPM1P09493 MIR98-201ENST00000606724 119 ntBASIC0.41□□□□□ -2.34
TPM1P09493 U2.17-201ENST00000611454 95 ntBASIC0.41□□□□□ -2.34
TPM1P09493 MTND4P4-201ENST00000439033 1366 ntBASIC0.41□□□□□ -2.34
TPM1P09493 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
TPM1P09493 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
TPM1P09493 SNORD73A-201ENST00000386062 65 ntBASIC0.4□□□□□ -2.35
TPM1P09493 MTCO2P8-201ENST00000412213 658 ntBASIC0.4□□□□□ -2.35
TPM1P09493 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.4□□□□□ -2.35
TPM1P09493 MTCO2P34-201ENST00000421994 607 ntBASIC0.4□□□□□ -2.35
TPM1P09493 CALM2P4-201ENST00000430810 426 ntBASIC0.4□□□□□ -2.35
TPM1P09493 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.4□□□□□ -2.35
TPM1P09493 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.4□□□□□ -2.35
TPM1P09493 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.4□□□□□ -2.35
TPM1P09493 AL096861.1-201ENST00000610899 123 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms