Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.59□□□□□ -2.15
SFTPBP07988 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.16
SFTPBP07988 RNU6-661P-201ENST00000362409 107 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 SNORD115-32-201ENST00000364079 82 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 Y_RNA.319-201ENST00000365138 92 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RNU6-1235P-201ENST00000384559 107 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 MIR586-201ENST00000385035 97 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SFTPBP07988 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AL033519.2-201ENST00000403958 392 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 MIR1277-201ENST00000408536 78 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RNU6-57P-201ENST00000411348 103 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RPL31P63-201ENST00000422565 375 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.58□□□□□ -2.16
SFTPBP07988 RNU6-498P-201ENST00000459468 107 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RNU6-948P-201ENST00000516374 107 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RNU6-58P-201ENST00000517143 103 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.58□□□□□ -2.16
SFTPBP07988 AC027288.2-201ENST00000553028 243 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC068790.6-201ENST00000602558 258 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 MIR6845-201ENST00000613182 61 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 MIR6128-201ENST00000615528 109 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC007014.2-201ENST00000615581 479 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC006001.4-201ENST00000622243 395 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AL078596.1-201ENST00000624856 447 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
SFTPBP07988 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SFTPBP07988 ZNF355P-201ENST00000427301 3216 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC027514.1-201ENST00000588561 1603 ntBASIC1.58□□□□□ -2.16
SFTPBP07988 AC010615.1-201ENST00000594254 1764 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 Y_RNA.86-201ENST00000363020 111 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 Y_RNA.301-201ENST00000364990 103 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 SNORA67.2-201ENST00000384300 149 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 MIR153-2-201ENST00000385225 87 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 RNA5SP504-201ENST00000410676 117 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 USP9YP30-201ENST00000430729 455 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 MTND1P17-201ENST00000448961 204 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 RNU7-57P-201ENST00000459540 60 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 SNORA25.14-201ENST00000516481 132 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 RNA5SP54-201ENST00000516951 92 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 RNU1-54P-201ENST00000517181 120 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.57□□□□□ -2.16
SFTPBP07988 UBL5P4-201ENST00000562584 236 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.57□□□□□ -2.16
SFTPBP07988 MIR4790-201ENST00000577799 79 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 MIR4273-201ENST00000582824 84 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AC016925.2-201ENST00000605108 242 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 AC009248.2-201ENST00000619826 254 ntBASIC1.57□□□□□ -2.16
SFTPBP07988 RNU6-873P-201ENST00000363833 107 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 SNORD115-8-201ENST00000363856 82 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 SNORD115-38-201ENST00000365037 82 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 RNU6-541P-201ENST00000384709 110 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 MIR520A-201ENST00000384862 85 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 RNU2-7P-201ENST00000410794 178 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 RPL23AP36-201ENST00000413895 458 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC243428.1-201ENST00000421099 264 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.56□□□□□ -2.16
SFTPBP07988 MTND1P4-201ENST00000435196 415 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC069439.1-201ENST00000494739 167 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.56□□□□□ -2.16
SFTPBP07988 Y_RNA.682-201ENST00000516457 100 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.56□□□□□ -2.16
SFTPBP07988 MIR5696-201ENST00000578474 85 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC018638.8-201ENST00000588755 281 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.56□□□□□ -2.16
SFTPBP07988 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC008873.1-201ENST00000625051 138 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 MIR338-201ENST00000636369 67 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 AC068137.4-201ENST00000638485 296 ntBASIC1.56□□□□□ -2.16
SFTPBP07988 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.56□□□□□ -2.16
SFTPBP07988 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SFTPBP07988 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SFTPBP07988 Y_RNA.48-201ENST00000362710 103 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 RNU6-727P-201ENST00000363592 107 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 RNU6-1019P-201ENST00000364424 107 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 RNU6-245P-201ENST00000384020 107 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.55□□□□□ -2.16
SFTPBP07988 MTCO3P29-201ENST00000432119 779 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AC074290.1-201ENST00000448883 135 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.55□□□□□ -2.16
SFTPBP07988 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 RNU6-344P-201ENST00000516635 111 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 SNORA44.1-201ENST00000517031 108 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.55□□□□□ -2.16
SFTPBP07988 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 SNORD11B-201ENST00000607707 90 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AL353149.1-201ENST00000610667 244 ntBASIC1.55□□□□□ -2.16
SFTPBP07988 AC002553.4-201ENST00000616896 331 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms